Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0615 ATGCTGGCGCTCGGGAGTCCTACCAGTGTTCGTACGAGCACTACCTGTGGTGCTTTGCTCAGAGAACTTGAGCAAATATGGAATGACATTGGGGAGAGCGAAGCAGAAAAAGACCGGATGTTGCTGGAGCTAGAGAGGGAGTGCTTAGAAGTCTATCGGAGAAAGGTGAGTGAGGCTGGCAATACCAAGGCACGACTTCATCAGTCTGTTATGGCAAAGGAAGCGGAGCTTGCAGCACTAATGGCTGCTCTTGGAGAACTTGGTTTTCATTCACAGACTCATATGGAGAAAAGGTCAACTTCATTGAAAGAGCAACTTGCATCAGTCACACCACTGGTAGAAGATCTAAGATCGAAGAAAGAGGAACGGTTGAAGCAGTTTGCTGATATTAGGGCACAAATTGAAAAGATCAGTGGTGAGATTTCAGGATACAATCATCACACTAATACCATGATTGGTTGCTTGACTCTGGAGGAACAAGATTTGTCATTAAGAAATCTTAATGAATGTCAGACACATCTTCGGACTCTTCAAAAGGAGAAGTCTGAACGCCTTAATAAAGTTCTGGAATATGTGAATGAAGTGCATACTCTATGTGGTGTGCTTGGGCTAGATTTTGGCCAGACTGTGAGTGATGTGCATCCAAGCTTGCATGGAACAAGCCTGGAGCAATCCACAAACATCAGCAATAGCACATTGGAAGGTCTAGAACATGCCATCCTTAAGTTGAAAACAGAAAGAAAAGGTCGAATTCTGAAGCTAAAAAATATTGGAGCATCCCTATTGGAACTTTGGAAGTTGATGGACACACCGAAAGAAGATAAGAGTGATTTTCTAAGAATTACTTCGTTCCTTGGAACATCAGAATTAGAAGTTACAGAACCAGATGTCCTCTCGACGGAGATGATTGAGCAGGCCTCAGCAGAAGTGGAGAGGCTCGGTAAGCTAAAAGCTAGCAGAATGAAAGAACTTGTCATGAAAAAGAGGGCAGAATTGGAGGAGATATGCAGAATTGCTCATATTGAACCGGATACAAACACAGCTGCTGAGAAATCTAATGCATTGATTGATTCAGGTCTTGTGGATCCTTCTGAACTTCTAGCAAACATTGAAGCACAGATAACAAAAGTAAAAGAAGAAGCTGTGAATCGAAAAGAAATTATGGACAGGATAGACCGATGGCTTTCAGCATGTGAAGAGGAGAATTGGCTTGAAGATTATAATCGAGATGAGAATCGGTACAGCGCTGGTAGAGGTGCTCACATAAACCTTAAACGTGCAGAGCGAGCTCGAGTAACCATAAGCAAGATTCCAGCAATCGTTGACAATCTGATAAGCAGAACACTTGCCTGGGAAAAGGAGAAAAGGATGTCATTTCTTTATGATGGGGTTAGTTTGGTGAGAATACTGGAGGATTACAAAGAAGCCAGACGACAGAAAGAAGAAGAGAAGAAAAGATACCGGGACCAGAAGAAGCTCCAAGATCTGCTCCTCACTGAGAAGGAAGCCATGTATGGGTCTAAACCTAGCCCGAAAAGAACCAATAGCTTTAGGAAGCCAAATGGTTATCGTGCAAATGGAAATGGATCCATGACACCTACACCTCGTCGGAACTCTGTTGGTGGTGCAACTCCTGAGCTCCTCACACCCCGTTCGTACTCTGGGCGCCAAAATGGATATTTCAAGGAAATGAGAAGGTTGTCTACTGCACCACTGAACTTTGTGGCCATATCAAAAGAAGATACAATGTCATATGCATCTATTTGTGGTTCTGAGCTAGGCTCACCTCCTCGGAGATAA 1800 0.435 MLALGSPTSVRTSTTCGALLRELEQIWNDIGESEAEKDRMLLELERECLEVYRRKVSEAGNTKARLHQSVMAKEAELAALMAALGELGFHSQTHMEKRSTSLKEQLASVTPLVEDLRSKKEERLKQFADIRAQIEKISGEISGYNHHTNTMIGCLTLEEQDLSLRNLNECQTHLRTLQKEKSERLNKVLEYVNEVHTLCGVLGLDFGQTVSDVHPSLHGTSLEQSTNISNSTLEGLEHAILKLKTERKGRILKLKNIGASLLELWKLMDTPKEDKSDFLRITSFLGTSELEVTEPDVLSTEMIEQASAEVERLGKLKASRMKELVMKKRAELEEICRIAHIEPDTNTAAEKSNALIDSGLVDPSELLANIEAQITKVKEEAVNRKEIMDRIDRWLSACEEENWLEDYNRDENRYSAGRGAHINLKRAERARVTISKIPAIVDNLISRTLAWEKEKRMSFLYDGVSLVRILEDYKEARRQKEEEKKRYRDQKKLQDLLLTEKEAMYGSKPSPKRTNSFRKPNGYRANGNGSMTPTPRRNSVGGATPELLTPRSYSGRQNGYFKEMRRLSTAPLNFVAISKEDTMSYASICGSELGSPPRR* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0615 599 FunFam 65-kDa microtubule-associated protein 6 374 507 - -
Vvi1g0615 599 MobiDBLite consensus disorder prediction 501 555 - -
Vvi1g0615 599 Coils Coil 466 493 - -
Vvi1g0615 599 MobiDBLite consensus disorder prediction 509 539 - -
Vvi1g0615 599 Pfam Microtubule associated protein (MAP65/ASE1 family) 19 514 - -
Vvi1g0615 599 Gene3D - 373 507 - -
Vvi1g0615 599 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 584 IPR007145 GO:0000226|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0615 Vvi-Chr1 6130318 6135868 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0615 14 561 EF-hand Containing Proteins AT5G62250 39.060 1.26e-112 345