Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0613 ATGTGGCCTAGATTAGTCGCCAACAAGTTTCTCAGGAAGAGGATTTGCAGCAACAACTTCGTTGCAGATTTTCCAAGCAACTCCGGAGCGTTGCTGCAGATTCCGACCCTTGACGAAGAGTCCCTCGTCTCTACGCCCATTTTCGATCAGAAGGAGATACCCAAGTACAAGATTTTTGTTAGTACATGGAACGTCGGTGGGGTTGCGCCACCTGAAGGTTTGAATATCGAGGATTGGCTGGACACATGCAAGACCTCCTGTGACATCTATGTTTTAGGGTTTCAAGAAGTGGTGCCTCTTAATGCAGCGAATATTCTAGGATCTGAGAATAGTAAGATTGCCATGAAATGGAATTCTTTGATCAGAGAAGCTCTGAACAAGAGGGTAAGAAGTCGAGACAAGAATGAAATAGATAAACAAGCTGGAGAAATGCAAAATGGATTTCCTGTAAAAGATGGAAAATTGGTAATTGAAAGCAGAGGTCCTCAAGACTACAGGTGCATCATAAGCAAGCAAATGGTGGGGATACTGATCTCAGTTTGGGTTCGAAGTAGTCTTCTTCCATACATACAGCACCCAAGTGTCTCCTGTGTAGGCTGCGGCATCATGGGCTGCCTAGGGAACAAGGGTTCAGTGTCTATTAGATTTCTGTTACATGGAACAAGCTTCTGCTTTGTTTGCTGTCATCTAGCTTCAGGGGGAAGAGTGGGGCATGAGAGGCATAGGAATTCAAATGCCGCGGATATACTATCTCGAACAAGCTTTCCTAGAGGCCCTTCACTTGATGTGCCGCAAAAGATTCTAGACCATGATCGAGTGATTCTGCTTGGAGACTTGAATTATAGGGTCTCCCTTCCGGAGGAAACCACGAGGTTACTTGTGGATAAAAGAGAGTGGAGTACCCTGCTTGAGAATGATCAGGTGCTTGACGTGAATTTTGCATGGAATATTGAAGCTAATGATGGAGGTGATGGATGGGCAAGTGCTTGGAGGTTGGCAGGAAGGACACATCGAATTTGCTCCTACTTACAAATATTATCCGAATTCCGACGTATACTATGGAGGTAG 1068 0.4504 MWPRLVANKFLRKRICSNNFVADFPSNSGALLQIPTLDEESLVSTPIFDQKEIPKYKIFVSTWNVGGVAPPEGLNIEDWLDTCKTSCDIYVLGFQEVVPLNAANILGSENSKIAMKWNSLIREALNKRVRSRDKNEIDKQAGEMQNGFPVKDGKLVIESRGPQDYRCIISKQMVGILISVWVRSSLLPYIQHPSVSCVGCGIMGCLGNKGSVSIRFLLHGTSFCFVCCHLASGGRVGHERHRNSNAADILSRTSFPRGPSLDVPQKILDHDRVILLGDLNYRVSLPEETTRLLVDKREWSTLLENDQVLDVNFAWNIEANDGGDGWASAWRLAGRTHRICSYLQILSEFRRILWR* 356
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0613 355 SMART i5p_5 54 353 IPR000300 GO:0016791|GO:0046856
Vvi1g0613 355 Gene3D Endonuclease/exonuclease/phosphatase 46 318 IPR036691 -
Vvi1g0613 355 SUPERFAMILY DNase I-like 51 318 IPR036691 -
Vvi1g0613 355 Pfam Endonuclease/Exonuclease/phosphatase family 62 300 IPR005135 GO:0003824
Vvi1g0613 355 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 52 308 IPR045849 GO:0004445
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g0613 Vvi-Chr1 6108006 6110154 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0613 48 308 Acyl Lipid Metabolism Gene Families AT1G65580 26.190 5.10e-20 89.7