Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0609 ATGGCAATGCCATCGGGAAATGTGGTGATATCGGATAAAATGCAGTTTCCGGGAGGTGGAGGCCGGGGTGGCGGCGGCGGCGCCGCTGAGATCCACCACCACCGGCAGTGGTTTCCCGACGAGCGCGACGGCTTTATCTCCTGGCTGCGCGGGGAATTCGCGGCAGCCAATGCTATTATTGACTCGCTCTGTAATCATTTACGCTTGATCGGCGAGCCTGGGGAGTATGATGCTGTGATTGGCTGTATTCAACAGAGGCGGTACAATTGGAGTTCGGTGCTGCATATGCAGCAGTATTTTTCTGTGGCGGAGGTCATTTATGCGTTGCAGCAGGTTGGGTGGAGGAGACAGCAGAGGCATTTGGATCCGGTGAAGGGTGCGGGGAAGGAGTACAAGAGATATGGTGTTGCATATAGGCAGGGGCAGAGGGGTGAGACTGCCAAGGATAGTCATAACTCTAATTTTGAGAATCATAGTCATGATGCTAATTCGTCTGGTACCCTCGAGAAAGGAGAGCGAGTGAGTGAAATATACGATGATGTGAAAGGAGGAGACAAAGGAGACGTTGTTGGAAAATTGGAAGATAAGGATTTGGCCGCTGCAGAGGAGAAGAAAGCTGGAACAGATGCTGTTGCAAAACCCAATGCAAATAGCTGTTCGAAGAGTTCAGAGAACTCAGAAGGATCCCGATGTGGCATTTCAGAGACTGAGGCCAATGACATGGATGATGGAGGCACGTTAAATCCTAAAGGATCTTGTAACATGATTATGGAGAACAATGCACATCCTGTCCAGAATCAGAATGAGAAGCCGAATCCCACTACTAGTCCAAAAACATTTGTTGGTACCGAGATATTTGATGGCAAGGCGGTTAACGTGGTTGATGGGCTAAAATTGTATGAAGAACTTTTTGATGATTCAGAAGTTTCAAAATTTGTTTCACTAGTAAATGATTTGAGAGCTGCCGGAAAAAGAGGACAGTTGCAAGGACAGACCTTTGTGGTTTCGAAGAGGCCCATGAAGGGGCATGGAAGAGAGATGATTCAATTGGGCGTCCCCATTGCAGATGCACCTCTTGAAGATGAAAGTGTGGTTGGGACTTCAAAAGATCGAAGAACAGAATCTATACCTTCCTTGCTGCAGGATGTTATTGGGCACTTGGTTGGCTCACAAGTCTTGACTGTGAAGCCGGATGCTTGCATAATTGATTTTTACAATGAGGGTGATCATTCGCAGCCTCACATCTGGCCAACTTGGTTTGGTAGGCCTGTTTGTATCCTATTTTTGACTGAATGCGATATGACTTTTGGGAGAGTAATTGGAGCAGACCACCCTGGGGACTACAGAGGCTCTCTTAAGCTTTCTCTTGTACCTGGATCCCTGCTTGTGATGCAAGGAAAATCAGCAGATTTTGCCAAACACGCTATTCCCTCCCTACGCAAGCAACGTATTCTTGTTACCTTCACAAAATCTCAACCAAAAAAAACCATGGCAAGTGATGGTCAGCGACTTCTTCCACCTGCAGCACAATCATCTCACTGGGTTCCGCCTCCTAGTAGATCACCCAACCATATGCGCCATCCTATGGGCCCAAAACATTATGGAGCAGTCCCAACAACTGGGGTATTACCGGCACCAGCACCACCCATGCGGCCACAGCTTCCACCTCCAAACGGCATGCAACCACTGTTCGTGACCACCGCAGTTGCACCAGCCATGCCTTTCCCTGCACCAGTTCCCCTCCCAACTGGGTCACCTGGGTGGCCAGCAGCTCCTCCAAGGCATCCTCCTCCTCGTCTCCCAGTCCCAGGCACTGGAGTTTTCCTTCCTCCACCTGGCTCTGGTAATTCTTCATCTCCTCAACACATATCAACTGAAGCAACCTCTACCTCTGTAGAGACAGCCGCCCCAACAGAAAAAGAAAATGGATCAGGAAAATCGAGTAGTAACAGCAACACTGTTTCTCCAAAAGGGAAATTGGATGGAAAGGTGCACAGGCAGGAGTGCAATGGAAGCATGGATGAAACTGGTGTTGATGAGAGAGCAGTGACAAAGGAAGAGCAGCAGCATAATGATGAACTCAAAGTGGCAAGCAAGCCAGCTGGAGCAGTTTAG 2115 0.4884 MAMPSGNVVISDKMQFPGGGGRGGGGGAAEIHHHRQWFPDERDGFISWLRGEFAAANAIIDSLCNHLRLIGEPGEYDAVIGCIQQRRYNWSSVLHMQQYFSVAEVIYALQQVGWRRQQRHLDPVKGAGKEYKRYGVAYRQGQRGETAKDSHNSNFENHSHDANSSGTLEKGERVSEIYDDVKGGDKGDVVGKLEDKDLAAAEEKKAGTDAVAKPNANSCSKSSENSEGSRCGISETEANDMDDGGTLNPKGSCNMIMENNAHPVQNQNEKPNPTTSPKTFVGTEIFDGKAVNVVDGLKLYEELFDDSEVSKFVSLVNDLRAAGKRGQLQGQTFVVSKRPMKGHGREMIQLGVPIADAPLEDESVVGTSKDRRTESIPSLLQDVIGHLVGSQVLTVKPDACIIDFYNEGDHSQPHIWPTWFGRPVCILFLTECDMTFGRVIGADHPGDYRGSLKLSLVPGSLLVMQGKSADFAKHAIPSLRKQRILVTFTKSQPKKTMASDGQRLLPPAAQSSHWVPPPSRSPNHMRHPMGPKHYGAVPTTGVLPAPAPPMRPQLPPPNGMQPLFVTTAVAPAMPFPAPVPLPTGSPGWPAAPPRHPPPRLPVPGTGVFLPPPGSGNSSSPQHISTEATSTSVETAAPTEKENGSGKSSSNSNTVSPKGKLDGKVHRQECNGSMDETGVDERAVTKEEQQHNDELKVASKPAGAV* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0609 704 MobiDBLite consensus disorder prediction 585 608 - -
Vvi1g0609 704 MobiDBLite consensus disorder prediction 585 704 - -
Vvi1g0609 704 MobiDBLite consensus disorder prediction 203 246 - -
Vvi1g0609 704 Gene3D - 282 498 IPR037151 -
Vvi1g0609 704 MobiDBLite consensus disorder prediction 141 171 - -
Vvi1g0609 704 SUPERFAMILY Clavaminate synthase-like 286 488 - -
Vvi1g0609 704 MobiDBLite consensus disorder prediction 611 657 - -
Vvi1g0609 704 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 36 654 IPR044842 GO:0003729|GO:0006402|GO:0032451
Vvi1g0609 704 MobiDBLite consensus disorder prediction 659 694 - -
Vvi1g0609 704 MobiDBLite consensus disorder prediction 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0609 Vvi-Chr1 6068804 6075823 Dispersed