Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0608 ATGGCTTCTCTTCTCTCTCAATCCGCTCTGTTTCAATCTAAGTCCTCGCTGCCTTTCCAAACCCTAGAGTCTCCTCAGCTGCGTTGCGGATCCGTTGTGTTTAAGGAGAAAGATGGGTTTGCTCTCAAGGCGTCGATGTCTATTGCCGAATCGAACTCCAGGTCGCCGGTTTTGGACAACGGGACGAAGAATCCGATCGTCGTCATTGATAATTACGACAGCTTCACTTACAATCTTTGCCAGTACTTGGGAGAGCTTGGGTGTAACTTTGAGGTCTACCGGAATGATGAGCTTAGTGTGGAGGAATTAAAAAAGAAAAATCCAAGAGGGGTGCTTATATCCCCAGGACCAGGTACACCTCAAGATTCAGGGATATCATTGCAGACTGTTTTGGAACTTGGACCTGTTGTACCCTTGTTTGGTGTCTGTATGGGGCTACAGTGCATCGGAGAAGCTTTTGGAGGGAAGATTGTACGTTCTCCTTTTGGCGTTATGCATGGAAAAAGCTCTCCTGTATATTATGATGAAAAAGGAGAAGATGGCTTGTTTTCAGGGTTATCAAATCCTTTCACTGCTGGTAGATATCATAGTCTTGTGATTGAAAAGGATACCTTTCCCAATGAAGCACTTGAGATTACAGCATGGACAGAGGATGGACTGATAATGGCTGCCCGTCACAAAAAATATAAGCATCTGCAGGGGGTTCAGTTCCATCCAGAGAGCATTATAACCAGTGAAGGCAGGGGGATTGTTCGCAATTTTGTCAGAATGATTGAGAGAAGCGAGTCTAAATATCATAACTAG 804 0.4478 MASLLSQSALFQSKSSLPFQTLESPQLRCGSVVFKEKDGFALKASMSIAESNSRSPVLDNGTKNPIVVIDNYDSFTYNLCQYLGELGCNFEVYRNDELSVEELKKKNPRGVLISPGPGTPQDSGISLQTVLELGPVVPLFGVCMGLQCIGEAFGGKIVRSPFGVMHGKSSPVYYDEKGEDGLFSGLSNPFTAGRYHSLVIEKDTFPNEALEITAWTEDGLIMAARHKKYKHLQGVQFHPESIITSEGRGIVRNFVRMIERSESKYHN* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0608 267 Pfam Glutamine amidotransferase class-I 67 255 IPR017926 -
Vvi1g0608 267 PRINTS Glutamine amidotransferase superfamily signature 111 120 - -
Vvi1g0608 267 PRINTS Glutamine amidotransferase superfamily signature 138 149 - -
Vvi1g0608 267 PRINTS Glutamine amidotransferase superfamily signature 234 247 - -
Vvi1g0608 267 Gene3D - 64 257 IPR029062 -
Vvi1g0608 267 CDD GATase1_Anthranilate_Synthase 66 255 IPR006221 -
Vvi1g0608 267 PRINTS Anthranilate synthase component II signature 187 199 - -
Vvi1g0608 267 PRINTS Anthranilate synthase component II signature 164 172 - -
Vvi1g0608 267 PRINTS Anthranilate synthase component II signature 138 149 - -
Vvi1g0608 267 PRINTS Anthranilate synthase component II signature 111 120 - -
Vvi1g0608 267 PRINTS Anthranilate synthase component II signature 234 247 - -
Vvi1g0608 267 PRINTS Anthranilate synthase component II signature 66 80 - -
Vvi1g0608 267 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 138 154 - -
Vvi1g0608 267 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 108 122 - -
Vvi1g0608 267 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 65 264 - -
Vvi1g0608 267 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 66 256 IPR006221 -
Vvi1g0608 267 SUPERFAMILY Class I glutamine amidotransferase-like 65 260 IPR029062 -
Vvi1g0608 267 FunFam Anthranilate synthase beta subunit 1 64 257 - -
Vvi1g0608 267 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 54 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0608 Vvi-Chr1 6048909 6061416 Dispersed