Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0599 ATGGAGCTAAAAGTATCCTTGAACGAAACCTTAACTCTAAGACCATGTGAACCGTCCAAAAGACAAACTATAGAACTGTCTGGTTTGGACAGGATATCTCCTGCAATTCTCTACACCATCTTCTTTTATAAGCTTCAATTGAGCGATGAATTATCTTCTGAGGCGGAAGATGTTGTTGAGAGAGCTAAAAGAGCTCTGCAGAAGGTGCTTGTTTCATGGTTTCCAGCTGCAGGGAGGTTAAGGATAAACGAAGGGACCGGGAAGCTAGAGATCGACTGCAACAATGAAGGTGTGACCATGATAATTGCAGCAACTGATTCCAAGCTTGAAGAGCTTGGTCGTCTGCATGAATACAAAGCATGTTACGAGAATCTGGTTCCTCAGCTTCTAGAAGCTGACGATGTATCAGTGAACCCACTGGTTGTTGTGCAGATAACAAGGTTTGCTTGTGGAGGGTTTTCAGTTGGTGTCGGTAGTAGCCATGCCTTGTTCGATGGTCCTGGAGCATTCAACTTTCTGGCATCCTGGGCTCATGTATCAAGTGGGAAAGATGAGTGTGATCTTCTTGTGCCCAATCATTCAAGAGATGGCCTTCTGCATGCTATCTATTCTCCCAATTCAAGCCCCGCAGATGCATCTTCCATATATGAACAAGACCATATTGCAGCAATTCAAGATCTCTATAGCATACCCATGCAAGCCATGGCGTCCAATGACAGATGTTGGGAAACTGCACTCACAACGTTCAGCCAAATTGATCCTCCAGGTGGGCTTCAACTTGTTACTCTCGGCATTGGGAAGGAAGTCGTAGTGACATGGAAGGGTCTAGCAATTGAACAAGGCAAGCTGTCAAAGTGTTCTACCTTTGATGTTCTATGTGCACATATCTGGAAGGCAAGGGTGAAAGCTCTTATGCTACACCCACGCACAAATATATGTTTGCAATTTCCAGTGGATTGTCGAAGCAGGATGGATCCCCCTCTTGGTAAGAACTTCACTGGAAATGCCTTTGTTCTTGCTTCAGTGTCATGCAAGGTGAGTGATCTATTACAAGAGCCCCTGCACAACACAATTTGGAGGATTCAAGCAGCAAAAGATGTGATCACAGATGAATACATCAAACTATATGCTAAGGCTCTGGAGTCCTCGGACAAGTTTTTCCCGTCTATGCGAGAACTGACAATAGTGACTGACTGGTTGAAATTTCCCTTCAATGCTCTCGATTTCGGCTGGGGAAAAGTTTCTAGTGCAGCTATCTTAGCCACTCCTGTCCCAGAAACTGCTTTTCTGATGTTAAATCTTGAACAATCTGCAGGGTTCTTAGTGAGGATAGGGATTGGAAGACAACATGTCCAAGATCTCATCACCAACTTCAATAACTTCAACTACTGA 1392 0.4432 MELKVSLNETLTLRPCEPSKRQTIELSGLDRISPAILYTIFFYKLQLSDELSSEAEDVVERAKRALQKVLVSWFPAAGRLRINEGTGKLEIDCNNEGVTMIIAATDSKLEELGRLHEYKACYENLVPQLLEADDVSVNPLVVVQITRFACGGFSVGVGSSHALFDGPGAFNFLASWAHVSSGKDECDLLVPNHSRDGLLHAIYSPNSSPADASSIYEQDHIAAIQDLYSIPMQAMASNDRCWETALTTFSQIDPPGGLQLVTLGIGKEVVVTWKGLAIEQGKLSKCSTFDVLCAHIWKARVKALMLHPRTNICLQFPVDCRSRMDPPLGKNFTGNAFVLASVSCKVSDLLQEPLHNTIWRIQAAKDVITDEYIKLYAKALESSDKFFPSMRELTIVTDWLKFPFNALDFGWGKVSSAAILATPVPETAFLMLNLEQSAGFLVRIGIGRQHVQDLITNFNNFNY* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0599 463 Gene3D - 1 208 IPR023213 -
Vvi1g0599 463 Pfam Transferase family 4 413 - -
Vvi1g0599 463 Coils Coil 48 68 - -
Vvi1g0599 463 Gene3D - 248 457 IPR023213 -
Vvi1g0599 463 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0599 Vvi-Chr1 5972668 5975687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0599 3 452 Monolignol Biosynthesis Gene Families AT5G48930 23.799 1.48e-36 137