Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0594 ATGTATGTGTTCCTACAGCTTGAGTATGATGTTCTGGAATATGTCGTGATTGAGCGCCTGGCACAAGGTGGTCGTGACAAACTAAAGGATGACGGACTTAATTTGTCGGACTGGCTTCAATCTTTGGCTTCATTCTGGGGTCACTTGTGTAAAAAATACCCATCAATGGAATTGAGGGGCCTTTTCCAGTATCTTGTGAATCAGTTGAAAAAGGGAAAAGGAATTGAGCTATTACTCTTGCAGGAACTGATCCAACAGATGGCAAATGTTCAGTACACGGAGAACCTGACTGAGGAACAGTTGGATGCTATGGCAGGGAGTGAGACCCTCCGGTATCAGGCTACTTCTTTTGGGATAACCAGAAACAACAAGCTGTTCATGCAGGCATTGATCAAATCGACTAACAGACTAAGGGATTCATTGCTTCCAAAAGAAGAACCAAAGTTGGCAATTCCCCTTTTATTGCTCATTGCTCAGCATCGTTCTGTTGTTCTCATAAATGCGGATGCTCCATACATTAAGATGGTTAGTGAGCAGTTCGATAGATGCCATGGAACCCTTCTTCAATATGTGGAATTCCTTTGTAGTGCAGTGACACCAGCAACAGCTTATGCTCAGCTGATTCCCCCACTGGAGGAACTTGTCCACATGTACCACCTTGATCCTGAGGTGGCCTTTTTAATTTATCGGCCTGTGATGAGGCTGTTCAAGTGTCGGAGTAGTTCTAATATCTTCTGGCCTTTAGATGATGTTGAATCTACAAATATGTCTACTGCAGAAAAGGAGTCTGAACCTACAGACTCTTCTGGTGAAGTGATTCTTGATCTTGGCCCTCCTTGGAAGCCTATTGTGTGGTCAGATCTTCTTGATACTGCACGTACCATGTTGCCATCAAAAGCCTGGAATAGCCTCTCTCCTGATCTCTATGCTACTTTCTGGGGTCTCACACTCTATGATCTTTATGTTCCTAGACATCGCTATGAGTCTGAAATTGCCAAGCAGCATTCTGCTCTTAAAGCTCTAGAAGAGCTTTCTGATAATTCAAATTCTGCAATTACCAAAAGAAAGAAAGACAAGGAAAGAATTCAAGAATCTCTAGATCGTTTAACTAGTGAACTCCAGAAGCATGAGGAGAATGTAGCATCTGTCCGTAGACGGCTTGCCCGTGAAAAGGACAAGTGGTTGAGTTCCTGTCCTGATACTTTGAAGATTAACATGGAGTTCCTTCAGCGCTGTATCTTTCCTCGCTGTACTTTCAGTATGCCCGATGCTGTGTATTGTGCTATGTTCGTACACACTCTTCATTCCCTTGGAACACCATTCTTTAACACAGTCAACCACATTGATGTTCTGATATGTAAAACCTTGCAACCTATGATATGCTGCTGTACTGAATATGAAGCTGGTAGACTTGGGAGGTTTCTGTATGAGACTATGAAGATTGCTTACTATTGGAAGAGTGATGAATCAATATATGAACGGGAGTGTGGGAACATGCCAGGCTTTGCTGTCTATTATAGATATCCTAACAGTCAGCGTGTCACATATGGCCAGTTTATTAAGGTACACTGGAAATGGAGTCAAAGAATCACACGGTTATTGATTCAGTGCTTGGAATCAACTGAGTACATGGAAATTCGAAATGCTCTTATAATGTTAACTAAAATTTCTAGCGTCTTCCCTGTTACACGAAAGAGTGGAATTAACCTTGAAAAACGGGTAGCTAAAATTAAAAGTGATGAAAGAGAGGATCTCAAGGTGTTGGCTACAGGTGTTGCTGCAGCTTTAGCTGCGAGGAAGCCTTCATGGGTTACAGACGAAGAATTTGGCATGGGCTATCTTGAACTGAAGCCTGCACCATCGCTTGCTTCAAAGTCTTTAGCTGGTAATTTGGTAGCTGTCCCAAATGGCTCTGGCCTGAACATTTTTCAGAATGAATCATCTGGAGGAAGAACAGTTGCATCTGGAACCCAACATTTAGATGCTGGGAATTCAGTCAAGGAGCAGGTATTAAGAGCAAAAACTGTAGATGGGAGGTTGGAGAGAACAGAAAGTGTTTCACTTGTGAAATCTGATCCAGTGCATGCAAAAGTTAAGGGTGGCTCATCAGTGAATGGTTCAGATATTCAGCAATCCATGCCCTCAGCTGCTTCACATACAGGAACATCCAGATCAGGGGAAAATCAAAGACCGGTGGATGAATCCACAAATAGAACATTGGATGAAAGCACAGTGAAAGTTTCTTCAAGGGCATCAACTGAATCCGAGTTGAGAGCTACAGGAAAGCGATCACTGCCCTCCGGCTCCCTCACAAAGCAACCAAAACTTGATGTTGCAAAAGATGATAGTAAATCTGGAAAAGGCGTTGGCCGAACTTCTGGCTCTTCCACCAGTGACAGAGATCTCCCTGCTCACCAGTTAGAGGGCAGGCAAAGTGGGGTGACCAATGTTTCTTCCGCAGGTACGGCTGATGGTAGCGTGGGTAAAGGCTCAACCCAATCGACAAGAACATCATTAGATATCCATGGTAGTGAATCTAAACCAGAGTCTGGATCTTCCAAGTCTGCTGATTTGAGGCTTTCTGCAGTCAAAGATGATGGTAATGAAGTTTCTGATAGGGCCCCCTCTTCTCGACCAATTCATTCTCCCAGGCACGATAATTCTGCCACTATAAAGTCTGGTGATAAACAGCAGAAAAGAACCAGTCCTGCTGAAGAGCCAGAAAGAGTAAATAAACGGCGGAAAGGGGACACTGAAGTGAGAGATTTCGAAGGTGAAGTTAGATTCTCTGACAAAGAGAGGTCCATGGATCCTCGATTAGACAAAAGTCATGCTGTGGATCTAGACAAATCAGGAACAGATGAACAAGGTATCAGTAGGGCCACTGATAAGCCTTCAGATAGGTTAAAAGATAAGGGAAGTGAAAGATATGAAAGGGACCACCGGGAAAGATTGGAACGTCCTGATAAGTCCCGTGGAGATGAAATGATAGCAGAGAAATCAAGAGATAGGTCAATGGAGAGACATGGAAGGGAGCGTTCAGTTGAAAGAGTGCAAGAGAGGAGCAGTGAAAGAAGTTTTGATAGACTCACTGATAAAGTTAAGGATGAAAGAAATAAGGATGACAGAGGTAAGATGCGCTACAGTGAAACATCTGTAGAAAAATCTCATGCAGATGATCGGTTCCATGGGCAAAGCTTGCCTCCCCCACCACCCTTACCTCCTCATATGGTCCCCCAATCTGTTACTGCTAGTAGAAGGGATGAAGATGCTGATAGACGGTTTGGAACTGCTAGACATGCTCAAAGGCTTTCTCCAAGACATGAAGAGAAAGAACGAAGGCGATCTGAGGAGATCTCACAAGATGATGCTAAACGCAGGAGGGAAGATGATATTCGAGAGAGAAAGCGAGAAGAACGGGAAGGTTTATCAATAAAGGTAGAGGACAGAGAGAGGGAGAAAGCAAGTCTTTTGAAAGAGGATATGGATCCAAGTGCCGCCTCTAAGAGACGGAAACTCAAAAGGGAGCACATGCCATCAGGGGAAGCTGGGGAGTATACGCCAGCAGCCCCACCACCTCCTCCCCCTGCTATTAGCATGTCACAAGCATATGATGGAAGAGAAAGAGGAGATAGAAAAGGGGCCATGGTCCAGCGTGCAGGTTACTTAGATGAACCAGGCCTGAGGATTCATGGTAAAGAAGTAACTGGCAAGATGGCCCGCCGAGATGCTGACCAGATGTATGACCGAGAGTGGGATGATGAGAAGAGGCAGAGAGCTGAACAAAAGCGGAGGCATCGGAAATAG 3807 0.4439 MYVFLQLEYDVLEYVVIERLAQGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGKGIELLLLQELIQQMANVQYTENLTEEQLDAMAGSETLRYQATSFGITRNNKLFMQALIKSTNRLRDSLLPKEEPKLAIPLLLLIAQHRSVVLINADAPYIKMVSEQFDRCHGTLLQYVEFLCSAVTPATAYAQLIPPLEELVHMYHLDPEVAFLIYRPVMRLFKCRSSSNIFWPLDDVESTNMSTAEKESEPTDSSGEVILDLGPPWKPIVWSDLLDTARTMLPSKAWNSLSPDLYATFWGLTLYDLYVPRHRYESEIAKQHSALKALEELSDNSNSAITKRKKDKERIQESLDRLTSELQKHEENVASVRRRLAREKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLYETMKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESTEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPSLASKSLAGNLVAVPNGSGLNIFQNESSGGRTVASGTQHLDAGNSVKEQVLRAKTVDGRLERTESVSLVKSDPVHAKVKGGSSVNGSDIQQSMPSAASHTGTSRSGENQRPVDESTNRTLDESTVKVSSRASTESELRATGKRSLPSGSLTKQPKLDVAKDDSKSGKGVGRTSGSSTSDRDLPAHQLEGRQSGVTNVSSAGTADGSVGKGSTQSTRTSLDIHGSESKPESGSSKSADLRLSAVKDDGNEVSDRAPSSRPIHSPRHDNSATIKSGDKQQKRTSPAEEPERVNKRRKGDTEVRDFEGEVRFSDKERSMDPRLDKSHAVDLDKSGTDEQGISRATDKPSDRLKDKGSERYERDHRERLERPDKSRGDEMIAEKSRDRSMERHGRERSVERVQERSSERSFDRLTDKVKDERNKDDRGKMRYSETSVEKSHADDRFHGQSLPPPPPLPPHMVPQSVTASRRDEDADRRFGTARHAQRLSPRHEEKERRRSEEISQDDAKRRREDDIRERKREEREGLSIKVEDREREKASLLKEDMDPSAASKRRKLKREHMPSGEAGEYTPAAPPPPPPAISMSQAYDGRERGDRKGAMVQRAGYLDEPGLRIHGKEVTGKMARRDADQMYDREWDDEKRQRAEQKRRHRK* 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0594 1268 MobiDBLite consensus disorder prediction 703 733 - -
Vvi1g0594 1268 MobiDBLite consensus disorder prediction 809 857 - -
Vvi1g0594 1268 Pfam Transcription- and export-related complex subunit 4 43 IPR021726 -
Vvi1g0594 1268 Coils Coil 1121 1153 - -
Vvi1g0594 1268 Coils Coil 352 393 - -
Vvi1g0594 1268 MobiDBLite consensus disorder prediction 888 1062 - -
Vvi1g0594 1268 MobiDBLite consensus disorder prediction 741 771 - -
Vvi1g0594 1268 Pfam Transcription factor/nuclear export subunit protein 2 301 595 IPR021418 -
Vvi1g0594 1268 Coils Coil 324 344 - -
Vvi1g0594 1268 PANTHER THO2 PROTEIN 6 1171 IPR040007 GO:0000347|GO:0006397|GO:0006406
Vvi1g0594 1268 MobiDBLite consensus disorder prediction 691 1268 - -
Vvi1g0594 1268 MobiDBLite consensus disorder prediction 788 802 - -
Vvi1g0594 1268 MobiDBLite consensus disorder prediction 1226 1260 - -
Vvi1g0594 1268 MobiDBLite consensus disorder prediction 1083 1181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0594 Vvi-Chr1 5855245 5880879 Dispersed