Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0586 ATGGCGGAAAATGGAAGCGCGGACGTGGAGAAGCAGAAGCTGCTTCTGCATCAGCATGAGGAGAAGCATTTCATGTCCAGTGAGGTTGTGCGTGACATCATCATCGGCGTCTCCGACGGCCTCACTGTCCCCTTCGCCCTCGCTGCTGGCTTGTCAGGTGCCAGTGCCTCCTCCTCTATCATCCTCACCGCCGGCATTGCCGAAGTTGCTGCCGGCTCCATCTCCATGGGACTCGGCGGGTACCTTGCGGCGAAAAGCGAGGCCGATCACTATATGAGGGAACTAAAGAGAGAACAAGAAGAGATCATCACCGTTCCTGACATGGAGGCGGCTGAGATTGGAGAGATACTAGAACAATATGGTGTGGAGCCACATGAGTATGGACCGGTGGTGGACGCTCTCAGGAGAAACCCTCAAGCATGGCTTGATTTCATGATGAAGTTCGAACTAGGATTGGAGAAACCAAACCCAAGAAGAGCACTGCAGAGCGCACTCACAATCGCAGTTTCTTACATCATGGGTGGGTTGGTACCCCTCATTCCTTACATGTTCATTCCTATAGCCCGAGAAGCTGTCATTGCCTCCGTTATCTTAACCTTGCTGGCACTGCTGGTCTTCGGCTTCGCCAAGGGCTACTTCACCGGCAATAAACCCTTCAGTAGCGCTTTGCAAACCGCCTTCATCGGCGCCCTTGCCTCCGCCGCTGCTTTCACCTTTGCTAAACTTGTTCGAGCATAG 738 0.5366 MAENGSADVEKQKLLLHQHEEKHFMSSEVVRDIIIGVSDGLTVPFALAAGLSGASASSSIILTAGIAEVAAGSISMGLGGYLAAKSEADHYMRELKREQEEIITVPDMEAAEIGEILEQYGVEPHEYGPVVDALRRNPQAWLDFMMKFELGLEKPNPRRALQSALTIAVSYIMGGLVPLIPYMFIPIAREAVIASVILTLLALLVFGFAKGYFTGNKPFSSALQTAFIGALASAAAFTFAKLVRA* 246
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0586 245 Coils Coil 81 101 - -
Vvi1g0586 245 CDD CCC1 8 243 - -
Vvi1g0586 245 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 14 243 IPR008217 GO:0005384|GO:0030026
Vvi1g0586 245 Pfam VIT family 30 239 IPR008217 GO:0005384|GO:0030026
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g0586 Vvi-Chr1 5765351 5767653 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0586 3 243 Nodulin-like Gene Family AT3G43660 23.554 1.90e-09 54.3