Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0585 ATGGAATCAATGGATGGTTCAGGGAAGCAGAAGCTGCTCCTAGATGATCATAAGGAGAGGCATTTCACGGCCGGTGAGATCGTCCGTGACATCATCATCGGCGTATCAGACGGTCTCACCGTTCCCTTCGCCCTTGCCGCGGGTTTGTCCGGTGCCAATGCCTCCTCTTCTATCATTCTCACCGCCGGCATCGCAGAAGTCGCTGCTGGCGCCATCTCCATGGGACTCGGCGGGTACCTTGCGGCCAAAAGCGAAGCTGATCACTACATGAGGGAACTGAAGAGAGAACAAGAAGAAATCATCACTGTCCCTGACATCGAGGCTGCGGAAATAGAAGAGATTCTATCGCAATATGGTCTTGAGCCTCATGAATCTGCACCTGTGGTGAACGCACTCAGAAGAAGGCCTCAAGCTTGGCTTGATTTCATGATGAAGTTCGAGCTGGGATTGGAGAAGCCTGATCCGAGGAGGGCAATGCAGAGCGCATTCACTATTGCCCTTGCGTACGTGTTAGGAGGATTTGTGCCCCTTATTCCATACATGCTCGTTCCAAGGGCTGAAGAGGCCGTGATAGCTTCGGTTGTTTTGACCTTGGTGGCATTGCTAATCTTCGGCTACGGAAAGGGTCGCTTCACTGGTAATAAACCTCTCAGAAGTGCCCTACAAACTGCACTCATAGGAGCTCTGGCATCCGCTGCTGCTTTTGGCATGGCTAAGGCTGTACGAGCAATCCCCTAA 738 0.523 MESMDGSGKQKLLLDDHKERHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIILTAGIAEVAAGAISMGLGGYLAAKSEADHYMRELKREQEEIITVPDIEAAEIEEILSQYGLEPHESAPVVNALRRRPQAWLDFMMKFELGLEKPDPRRAMQSAFTIALAYVLGGFVPLIPYMLVPRAEEAVIASVVLTLVALLIFGYGKGRFTGNKPLRSALQTALIGALASAAAFGMAKAVRAIP* 246
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0585 245 Coils Coil 79 99 - -
Vvi1g0585 245 Pfam VIT family 28 238 IPR008217 GO:0005384|GO:0030026
Vvi1g0585 245 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 18 242 IPR008217 GO:0005384|GO:0030026
Vvi1g0585 245 CDD CCC1 7 241 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g0585 Vvi-Chr1 5759051 5761273 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0585 7 241 Nodulin-like Gene Family AT3G43660 25.726 5.01e-10 55.8