Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0581 ATGGAAACCAACTGCGGTGAGAAAGAGAAAATAAGCCCGGGATTTGTAGGAGAAAGTGCCGGCGCACAAGAGAATGAAGAGATTCTCAGGAAGAGAATCTCAGGCCACCCTCTGTTCGGCCTTCTGATTGAGAACCACCTGAACTGTTTGAAGGTGGGGTTAGGCGAATTTGGAGAGGTTGGTATAACAACTGAACCAGACAAAGCAGCTGACTCCAAACCCAACATTAACGGCATCATTCAGAATCCATCCGACCTCGATCACTTCATGGAAGCATACTGCATGGCACTGAGCAACCTGAAAGAGGGCATAGAGGAAGCGCAACAAGAATCTGCATCTTTCATCAAGGCCACCTACCTTCAGCTTGGAGAGCTCACTCACACCAACCACCCTTAA 396 0.4848 METNCGEKEKISPGFVGESAGAQENEEILRKRISGHPLFGLLIENHLNCLKVGLGEFGEVGITTEPDKAADSKPNINGIIQNPSDLDHFMEAYCMALSNLKEGIEEAQQESASFIKATYLQLGELTHTNHP* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0581 131 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 18 130 - -
Vvi1g0581 131 Pfam KNOX2 domain 85 126 IPR005541 GO:0003677|GO:0005634
Vvi1g0581 131 Coils Coil 90 110 - -
Vvi1g0581 131 SMART KNOX2_2 75 127 IPR005541 GO:0003677|GO:0005634
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0581 27 128 Homeobox Transcription Factor Family AT4G08150 29.245 1.30e-07 47.0