Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0579 ATGAAGGATGGAATTGCAGAGATGGCTCTAGCCAGCCTTGGGAAAGGATTCGATTTAACATCTGATTTCCGCCTCAAGTACTGCAAAGGAAAACGCCCGCTGGTTTTGCTGAACGAGGCTGAGAAACGAGACCTGCTGCTGCCTGGTTTTGGGCTTCTCAGAGACGTTTCCGTCGATATCAAATGCGATAAAGGCGATCGAGTTCGATATCAATCTGATATTCTCGACTTCCATCAGATGTCTGAATTGTTCAACCAGAAAGCATCAGTCCCTGGGAAAATTCCATCTGGGATGTTTAATGCTATGTTTGGATTTCAAAGTGGTTCGTGGGCTAGAGATGCGGCCAAGACAAAGTACTTGGCCCTTGATGGTTACTTCATCGTCCTCTTCAGTCTTCACATCCATCGCTATCCGCTTCTCCTCTCTGAGGATGTTCGAAATGCTGTTCCCTCTACTTGGGATCCCTGCGCTCTCGCCAGGTTCATAGAGAAATACGGAACCCACATTGTGGTGGGGTTGAGCGTGGGCGGCCAGGATGTGTTGCTGGTGAGGCAAGACAAATCTTCCTCAATGGGGCCATCCGAGCTTAAACAACATATAGAGGAACTTGGAGATCAGCTTTTTACAGGCTCCTGCACCTTCTCTCCAATCCATGCCAAATCCAAAGAACACAACAAAAACAAGGCACCACAAGCATTCAATCTTTTTGACCCGCAGCCTCTCCCCTTCAACAGCTTCTCCTCCGTCTCCGCCAAAGATGGTATAACAGTGATAAGCTCCAAGAGAGGCGGGGAAGCATTCGCAGAGAGCCACTGCGAGTGGCTTCTAACAGTACCGTCAATGCCGGATGCAGTCCAGTTCAGCTTTATTCCTATCACCTCTCTCCTCAAAGGTGTACCCGGCAGAGGCTTCTTATCCCACGCCATCAATCTCTATCTTCGATACAAGCCTCCAATATCTGATTTACAGTACTTTCTGGAATTCCAAGTGCACAAACTATGGGCTCCTGTTCACAGTGATCTCCCACTAGGTCCTACCACGAATATGGCTGTTGCATCGCCTGCCCTCCGTTTCAATTTGATGGGTCCTAAACTATACATAAACACTAGTCAGGTTACAGTAGGGAGGAGACCTGTTACAGGCATGAGGTTGTATCTTGAGGGCATGAAGTGCAACAGGTTAGCCATCCACCTCCAACATTTATCAAACACCCCGGTGATGCTTCAAAACCTCATAGACGATACACCGATGTGGCGAGGATCAGAAGAGGTGACGGATGACCGATTCTTGGAGCCTATCCACTGGAAAAAGTTCTCCCACATATGCACGGCATCAGTTAAATACGACCCCAGCTGGTCAACCCGAGAAGATGTGTCCTTCATCGTCACAGGAGTTCAGCTTCACGTGAAGAAGCACGACTCCAAGACTGTTCTCCATCTCCGACTTCGCTTCTCCAAAGTTCGGAATTCTTTCATAGCCCAGAAAAATTGGATGCAAGGGGCATCAGAAGGTTCTCAGAAGTCGAGCTTTTTCTCGGCCATAAGCACGTCGATAACAGGCAGCTCAGAGAAAGAGAAACAAGTGGTGGTGGATTCTAGTGTGTATCCTGATGGTCCTCCAGTGCTTGTGCAGACACCAAAGCTTTTGAAATTCGTAGAAATGTCACAGGTAAGTAAAGGGCCACAGGATAGTCCTGGACATTGGCTAGTCACAGGAGCAATGCTCCAGATGGAGAAGGGGAAGATACGTCTACATGTTAAGTTCTCTCTCCTCAATCTCTCCTCACCAGAGAGACCAAGTCAAGATTAA 1809 0.4809 MKDGIAEMALASLGKGFDLTSDFRLKYCKGKRPLVLLNEAEKRDLLLPGFGLLRDVSVDIKCDKGDRVRYQSDILDFHQMSELFNQKASVPGKIPSGMFNAMFGFQSGSWARDAAKTKYLALDGYFIVLFSLHIHRYPLLLSEDVRNAVPSTWDPCALARFIEKYGTHIVVGLSVGGQDVLLVRQDKSSSMGPSELKQHIEELGDQLFTGSCTFSPIHAKSKEHNKNKAPQAFNLFDPQPLPFNSFSSVSAKDGITVISSKRGGEAFAESHCEWLLTVPSMPDAVQFSFIPITSLLKGVPGRGFLSHAINLYLRYKPPISDLQYFLEFQVHKLWAPVHSDLPLGPTTNMAVASPALRFNLMGPKLYINTSQVTVGRRPVTGMRLYLEGMKCNRLAIHLQHLSNTPVMLQNLIDDTPMWRGSEEVTDDRFLEPIHWKKFSHICTASVKYDPSWSTREDVSFIVTGVQLHVKKHDSKTVLHLRLRFSKVRNSFIAQKNWMQGASEGSQKSSFFSAISTSITGSSEKEKQVVVDSSVYPDGPPVLVQTPKLLKFVEMSQVSKGPQDSPGHWLVTGAMLQMEKGKIRLHVKFSLLNLSSPERPSQD* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0579 602 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 4 592 IPR044663 GO:0006952|GO:0012501|GO:2000031
Vvi1g0579 602 Pfam MAC/Perforin domain 98 312 IPR020864 -
Vvi1g0579 602 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 326 IPR020864 -
Vvi1g0579 602 SMART MACPF_8 117 314 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0579 Vvi-Chr1 5701636 5706168 Dispersed