Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0577 ATGAGCAACAACCGCGCAGCCACAACGCAACAATCTTTTCCGATGAAGGGAGGAGATGGACCTCACAGCTACGTCAACAACTCCCACTTACAGAGAGAAGCTACAGATGCGTGTAGGACTATGATTGAAGAGGCAATCGCTCAGAAGCTTGATGTAAAGTGCTTCTCTTCAAACCCGTTTCGTCTTGCGGATTTGGGATGTTCGGTTGGGCCAAATACCTTCATATCGATGCAACATATAGTGGAAGCTGTAGAAAGGAAGTACCTGGAGCAAGGCCTCAAATCTCAAATACCCGAATTTCAAGTCTTCTTCAATGATCATGTAGCTAATGATTTCAATACCCTCTTTGCATCCCTCCCAACTGAAAGGCGGTACTTTGCCTGTGGCGTCCCGGGTTCTTTCCATGGACGGTTATTCCCGGAGTCATCTATCCATTTCATGTTTTCCTCTCATGCAATCCACTGGCTCTCAAAGGTGCCCGAAGAGTTGTTGGACAAAAACTCCCCTGCATGGAACAGGGGAAGAATTCACTACACCAGTGCCCCAGATGAAGTAAGCCATGCTTATGCAGCTCAATTTGACCATGACATGGAGATCTTTTTGAGTGCCAGAGCTAAGGAACTTGTGGTTGGAGGGATCATAGTGCTTACCATGGCAGCTCTCCCAAATGGGATCCCTGCTTCTCGAATCCCATCTGGTGTTATGTTCGATCTTTTGGGAGCAAGCCTCATGGATATGACCAAAGCGGGATTAATCAATGAAGCTCAAGTGGACTCCTTCAATTTGCCTGTCTATGCACCCTCCCAGGAGCAGATGACCGACCTGGTTAAAAGAAATGGGTGTTTCACCATTGAGAGAATGGAGTTAGTGTACCGTGCATCAAAGCTTGTTGCCCCGATCACTGGAAAGGAATGTGGAATGCACCTTAGAGCAGGCATGGAGGGAATGATTGCCAAACATTTTGGAAGTGGGATTATTGATGAACTGTTTGATACGTTTTCCAAGAAATCTGTGGAGTTTTCCCACCAGCTGGAATCAAGCACAAGAGAAGGAGCTCAATTATTTGCTGCTCTGAGGCGTAAATGA 1086 0.4659 MSNNRAATTQQSFPMKGGDGPHSYVNNSHLQREATDACRTMIEEAIAQKLDVKCFSSNPFRLADLGCSVGPNTFISMQHIVEAVERKYLEQGLKSQIPEFQVFFNDHVANDFNTLFASLPTERRYFACGVPGSFHGRLFPESSIHFMFSSHAIHWLSKVPEELLDKNSPAWNRGRIHYTSAPDEVSHAYAAQFDHDMEIFLSARAKELVVGGIIVLTMAALPNGIPASRIPSGVMFDLLGASLMDMTKAGLINEAQVDSFNLPVYAPSQEQMTDLVKRNGCFTIERMELVYRASKLVAPITGKECGMHLRAGMEGMIAKHFGSGIIDELFDTFSKKSVEFSHQLESSTREGAQLFAALRRK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0577 361 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 14 338 IPR005299 GO:0008168
Vvi1g0577 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 361 IPR029063 -
Vvi1g0577 361 Gene3D Vaccinia Virus protein VP39 27 293 IPR029063 -
Vvi1g0577 361 FunFam SABATH methyltransferase 1 27 162 - -
Vvi1g0577 361 MobiDBLite consensus disorder prediction 1 16 - -
Vvi1g0577 361 Gene3D - 13 339 IPR042086 -
Vvi1g0577 361 Pfam SAM dependent carboxyl methyltransferase 50 360 IPR005299 GO:0008168
Vvi1g0577 361 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0577 Vvi-Chr1 5687062 5688738 Dispersed/Tandem