Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0575 ATGTTTGATATCCAGGTCTTGCAAGGCATTGAAAAGCCATTGAATTTCACAGGTGGCAAGCGTCCATCAAATAAAGGCATAAAGCACACGGCTCACCTAGGCTCTCCACAGACACAGAGAGTTATAAGCAACAACGACGCAGCCACAATGCAACAATCTTTTCCGATGAACGGAGGGGATGGACCTCATAGCTACCGCAACAACTCCCATTTTCAGAGACAAGATATGAATGTGTCGAGAACTATGATTGAAGAGGCAATTGCTAAGAAGCTTGATGTAAAGTGCTTCTCTTCAAACCCGTTTCGTCTTGCAAATTTGGGATGTTCAGTTGGGCCAAATACCTTCATAGCAATGCAACATATAGTGGAAGCTGTAGAAAGGAGGTACCTGGTGCAAGGTCTCAAATCTGAGATGCCCGAATTTCAAGTCTTCTTTAATGATCATGTGGGTAATGATTTCAATACCCTATTTGCATCCCTCCCAACTGAGAGGCGGTACTTTGCCTGTGGCGTCCCGGGTTCTTTCCATGGCCGGTTATTCCCGGAGTCATCTATCCATTTCATGTTTTCCTCTCATGCACTCCACTGGCTCTCAAAGGTGCCTGAAGAGTTGTTGGACAAAAACTCCCCTGCATGGAACAGGGGAAGGATTCACTACACAAGTGGCCCAGAAGAAGTAAGCCATGCTTATGCAGCTCAATTTGAGCATGACATGGAGATCTTTCTGAGTGCCAGAGCTAAGGAACTTGTGGTTGGAGGGATGATAGTGTTTCTCATTCTAGCTCTCCCAAATGGGATCCCTGCTTCTCAAAACCCATATGGTATTATGTTCGATCTTCTGGGATCATGCCTCATGGACATGGCCAAGGAGGGATTAATTAGTGAAGCTCAAGTGGATTCCTTCAACTTGCCTATTCATCTGGCCTCTCCCGAGCAAATGACAGAGCTGGTGGAAAGAAATGAGTGTTTAACCATTGAGAGAATGGAGTTAGTGAACTCTAGATCAAAACTTGTTGGCCCGATCAATGGAAAGGAATATGCAATGTACCTTAGAGCTGGCTTGGAGGGAATTTTTGCCCAACATTTTGGAAGTGGGATTATTGATCAACTGTTTGATAGTTTTTCCAAGAAAATTATGGAGTCCTCCCACCAGCTGGAATCAGGCAACAAAGAAGGAATTCTATTGTTTGTTGTTCTGAGGCGTAAATGA 1209 0.445 MFDIQVLQGIEKPLNFTGGKRPSNKGIKHTAHLGSPQTQRVISNNDAATMQQSFPMNGGDGPHSYRNNSHFQRQDMNVSRTMIEEAIAKKLDVKCFSSNPFRLANLGCSVGPNTFIAMQHIVEAVERRYLVQGLKSEMPEFQVFFNDHVGNDFNTLFASLPTERRYFACGVPGSFHGRLFPESSIHFMFSSHALHWLSKVPEELLDKNSPAWNRGRIHYTSGPEEVSHAYAAQFEHDMEIFLSARAKELVVGGMIVFLILALPNGIPASQNPYGIMFDLLGSCLMDMAKEGLISEAQVDSFNLPIHLASPEQMTELVERNECLTIERMELVNSRSKLVGPINGKEYAMYLRAGLEGIFAQHFGSGIIDQLFDSFSKKIMESSHQLESGNKEGILLFVVLRRK* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0575 402 Gene3D - 54 382 IPR042086 -
Vvi1g0575 402 MobiDBLite consensus disorder prediction 14 38 - -
Vvi1g0575 402 FunFam SABATH methyltransferase 1 68 203 - -
Vvi1g0575 402 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 55 381 IPR005299 GO:0008168
Vvi1g0575 402 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 50 402 IPR029063 -
Vvi1g0575 402 Pfam SAM dependent carboxyl methyltransferase 91 401 IPR005299 GO:0008168
Vvi1g0575 402 Gene3D Vaccinia Virus protein VP39 68 334 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0575 Vvi-Chr1 5673027 5681127 Dispersed/Tandem