Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0570 ATGAAGGCACCAGCTCTCGCCCACCATCACCACCTCCTCTCTGCAACTCGCATTCCTAGGACCAACCTCAGACCCCGTACCGCCACCCCCACTTCCACCATCCGCATGTCCCTCCAAGAAAATGCCCCCTCCCTTGCTGTAGTAGGCGTTACCGGCGCCGTCGGTCAGGAGTTCCTCTCCGTCCTGTCCGACCGCGGCTTCCCATATCGATCCATCAAAATGCTGGCCTCCAAGCGCTCCGCCGGCAAACACCTCACTTTCGAGGACAACGACTACGTTATTGAGGAACTCACCGCTGATAGCTTCGACGGCATCGACATCGCTCTCTTTAGCGCCGGAGGCTCCATCAGTAAACAGTTTGGTCCGATTGCGGTTGATCGGGGCTCCATTGTTGTTGATAACAGTTCGGCATTTAGGATGGATGAGAACGTGCCGCTTGTTATTCCAGAAGTGAATCCGGATGCAATGAAGCATATTAAGCTCGGGAGTGGAAAGGGGGCGCTTATTGCCAACCCCAATTGTTCTACTATTATATGCCTTATGGCTGCCACGCCCCTTCATCGGTGCGCCAAGGTAGTACGCATGGTTGTCAGCACATATCAGGCAGCTAGTGGTGCTGGTGCTGCTGCAATGGAGGAGCTTGAACTGCAAACTCGTGAGGTCTTGGAGGGAAAACAACCAACTTGTAAAATTTTCAAGCAACAGTATGCTTTTAATCTCTTTTCACACAATGCACCTGTTCTTCCAAATGGGTACAATGAAGAGGAAATGAAATTAGTAAAAGAGACAAGGAAAATCTGGAATGACATGAATGTTAAAGTGACTGCCACATGCATACGGGTCCCTGTTATGCGTGCGCATGCTGAGAGTGTTAATCTCCAGTTTGAGAATCCCCTTGATGAGGATAAAGCAAGGGATATCCTGAAGAACGCTCCTGGTGTGGTGGTTATTGATGAGCGGCCATCCAATAACTTTCCTACCCCATTAGAGGTATCAAACAAAGATGATGTTGCAGTAGGCAGGATACGCCGTGATGTTTCTCAGGATGGAAATTTTGGGCTGGACATCTTTGTCTGTGGTGATCAAATACGCAAGGGGGCTGCACTTAATGCCATCCAGATTGCCGAGATGTTGCTGTAG 1140 0.5 MKAPALAHHHHLLSATRIPRTNLRPRTATPTSTIRMSLQENAPSLAVVGVTGAVGQEFLSVLSDRGFPYRSIKMLASKRSAGKHLTFEDNDYVIEELTADSFDGIDIALFSAGGSISKQFGPIAVDRGSIVVDNSSAFRMDENVPLVIPEVNPDAMKHIKLGSGKGALIANPNCSTIICLMAATPLHRCAKVVRMVVSTYQAASGAGAAAMEELELQTREVLEGKQPTCKIFKQQYAFNLFSHNAPVLPNGYNEEEMKLVKETRKIWNDMNVKVTATCIRVPVMRAHAESVNLQFENPLDEDKARDILKNAPGVVVIDERPSNNFPTPLEVSNKDDVAVGRIRRDVSQDGNFGLDIFVCGDQIRKGAALNAIQIAEMLL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0570 379 Hamap Aspartate-semialdehyde dehydrogenase [asd]. 42 379 IPR012080 GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661
Vvi1g0570 379 Gene3D Dihydrodipicolinate Reductase; domain 2 174 361 - -
Vvi1g0570 379 Pfam Semialdehyde dehydrogenase, dimerisation domain 185 365 IPR012280 GO:0008652|GO:0016620|GO:0046983
Vvi1g0570 379 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 32 379 - -
Vvi1g0570 379 NCBIfam aspartate-semialdehyde dehydrogenase 45 378 IPR005986 GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661
Vvi1g0570 379 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 201 IPR036291 -
Vvi1g0570 379 Pfam Semialdehyde dehydrogenase, NAD binding domain 45 158 IPR000534 GO:0016620|GO:0051287
Vvi1g0570 379 PIRSF ASA_dh 42 379 - -
Vvi1g0570 379 SMART Semialdhyde_dh_3 44 159 IPR000534 GO:0016620|GO:0051287
Vvi1g0570 379 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 173 366 - -
Vvi1g0570 379 Gene3D - 45 378 - -