Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0564 ATGGCGACAATGGAGAGCTTGATCGGACTCGTCAACAGAATCCAGAGAGCCTGCACCGTCCTAGGCGATCACGGTGGCGAAGGAATGTCCCTCTGGGAAGCTCTTCCTTCTGTTGCTGTTGTAGGAGGCCAGAGCTCTGGGAAATCGTCTGTGTTGGAAAGCGTGGTTGGAAGGGACTTCCTGCCTCGTGGATCCGGCATTGTGACAAGGAGGCCTCTGGTATTGCAACTTCACAAGACAGAACAAGGGCAGGCCGAATATGGGGAGTTTCTTCACGCACCAAAAAAGAAGTTTACTGATTTTGCTTCCGTCCGTAAGGAGATTCAAGATGAAACAGACCGTATAACTGGGAAGACAAAGCACATATCTAACATTCCAATTCACCTGAGCATTTATTCACCCAATGTTGTCGACTTGACTCTCATTGATCTTCCTGGGATGACAAAGGTTGCTGTAGAGGGACAACCAGACAGTATTGTTGAAGACATTGACAACATGGTTCGTTCTTATGTTGAGAAGCCTAACTGCATTATATTGGCGATTTCTCCTGCTAATCAAGACATTGCCACTTCGGATGCTATAAAGCTTGCTAGAGAAGTTGATCCTACAGGTGAAAGAACATTTGGAGTGCTAACAAAACTTGATCTGATGGACAAGGGAACCAATGCTCTGGATGTTCTGGAAGGGAGATCATATAGGCTGCAGCATCCCTGGGTGGGAATTGTAAATCGTTCACAAGCTGATATCAACAAGAATGTTGACATGATTGCTGCCCGTCAAAAAGAGCGTGAATATTTTGAAAGCAGCCCTGAGTATGGACACTTGGCACATAAAATGGGCTCAGAGTATCTTGCAAAACTTCTATCCCAGCATTTGGAGTCTGTCATTCGGCAACGAATTCCAAGTATTATTGCTTTGATTAATAAGACAATTGATGAGCTTAATGCAGAGTTGGATCGTATTGGCAGGCCTATTGCAGTAGATTCAGGGGCCCAGTTGTATACAATTTTGGAAATGTGTCGTGCATTTGACCGTGTCTTTAAGGAACATCTAGATGGAGGGCGAGCTGGTGGAGATAAGATATATGGAGTTTTTGATCATCAATTGCCTGCTGCTTTAAAAAAGCTCCCCTTTGATCGTCATCTTTCTTTACAAAATGTCCGAAAAGTTGTTTCAGAGGCAGATGGTTACCAACCACATTTAATTGCTCCAGAACAAGGATACAGACGACTTATTGATGGATCCCTCAGCTTTTTCAAAGGCCCGGCTGAAGCCTCTGTTGATGCTGTGCATTTCGTTTTGAAAGAACTTGTGCGGAAATCAATAGCTGAAACACAGGAATTGAAGCGATTTCCATCGCTTACAGCTGACATAGCAGCTGCTGCAACAGAAGCATTGGAAAGATTCAGGGAAGAAAGCCGCAAAACAGTGTTACGGCTGGTAGAAATGGAGTCTAGTTACCTCACAGTAGATTTTTTTCGAAAGCAGCAGTTTGAAACAGAAAAACAAGAGAAGAATGCAAACCCATCAGGCCCAAATATGGATCGCTACACAGAAATCCATCTCAGGAGGATAGGATCAAATGTATCAGGGTATATCAGTATGATTTGTGAAACAATGAAGAATTCCATCCCCAAGGCTGTTGTTTATTGTCAAGTCCGAGAGGCCAAAAGATCTCTGCTCAGCCACTTCTATGCTCAGCTTGGGAGAAGAGAGAAGGAGCAGCTTGGTTCAATGTTGGATGAGGACCCGGCACTCATGGAGAAGAGACAGGCCATAGCTAAGAGGCTGGAGCTGTACAAGTCGGCAAGAGATGAGATCGACTCAGTGTCATGGAAATGA 1842 0.4457 MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEQGQAEYGEFLHAPKKKFTDFASVRKEIQDETDRITGKTKHISNIPIHLSIYSPNVVDLTLIDLPGMTKVAVEGQPDSIVEDIDNMVRSYVEKPNCIILAISPANQDIATSDAIKLAREVDPTGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGIVNRSQADINKNVDMIAARQKEREYFESSPEYGHLAHKMGSEYLAKLLSQHLESVIRQRIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDRVFKEHLDGGRAGGDKIYGVFDHQLPAALKKLPFDRHLSLQNVRKVVSEADGYQPHLIAPEQGYRRLIDGSLSFFKGPAEASVDAVHFVLKELVRKSIAETQELKRFPSLTADIAAAATEALERFREESRKTVLRLVEMESSYLTVDFFRKQQFETEKQEKNANPSGPNMDRYTEIHLRRIGSNVSGYISMICETMKNSIPKAVVYCQVREAKRSLLSHFYAQLGRREKEQLGSMLDEDPALMEKRQAIAKRLELYKSARDEIDSVSWK* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0564 613 Gene3D Dynamin, middle domain 334 590 - -
Vvi1g0564 613 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Vvi1g0564 613 FunFam Dynamin-related protein 1C 332 590 - -
Vvi1g0564 613 PRINTS Dynamin signature 133 150 IPR022812 -
Vvi1g0564 613 PRINTS Dynamin signature 202 218 IPR022812 -
Vvi1g0564 613 PRINTS Dynamin signature 225 244 IPR022812 -
Vvi1g0564 613 PRINTS Dynamin signature 60 77 IPR022812 -
Vvi1g0564 613 PRINTS Dynamin signature 35 53 IPR022812 -
Vvi1g0564 613 PRINTS Dynamin signature 183 201 IPR022812 -
Vvi1g0564 613 Pfam Dynamin GTPase effector domain 518 610 IPR003130 GO:0003924|GO:0005525
Vvi1g0564 613 Pfam Dynamin family 38 213 IPR045063 -
Vvi1g0564 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 309 IPR027417 -
Vvi1g0564 613 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Vvi1g0564 613 PANTHER DYNAMIN 5 610 IPR022812 -
Vvi1g0564 613 ProSiteProfiles GED domain profile. 522 613 IPR020850 -
Vvi1g0564 613 FunFam dynamin-related protein 1E 4 310 - -
Vvi1g0564 613 Pfam Dynamin central region 222 490 IPR000375 -
Vvi1g0564 613 Gene3D - 4 310 IPR027417 -
Vvi1g0564 613 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Vvi1g0564 613 SMART GED_2 517 610 IPR003130 GO:0003924|GO:0005525
Vvi1g0564 613 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0564 Vvi-Chr1 5571749 5579852 Dispersed