Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0563 ATGGCCGAGATTTCCGGCGACATAGCGAGTGTTTCTCCGGTGGAGCTGAGCTACAGCGAGAACGGAGGCAATGGTGGCCGGCCGCCGGCGAATGAGGCGGTGTATGTGGTATCCACTCCTCCGCTGACGGTATCGCAATCCTTCAAGGAGGGGAAGGGGAGTTCCAGGAGGAGGGCGTCGGTGCGCCCCAGCTTGGATGCGGATGAGTTCATAAACCTTTTGCACGGGTCGGATCCGGTGAAAGTTGAGTTGAATCGGTTGGAGAATGAAGTCAGAGATAAGGATCGAGAATTGGGGGAAGCACAAGCGGAGATCAAGGCTTTAAGGTTTTCGGAACGTCTTAGAGAAAAGGCCGTCGAAGAGATTACTGAAGAACTGTCAAAGGTGGAGGAGAAGCTTAAGTTAACAGAATCTCTTCTAGAAAGCAAGAATCTCGAGATCAAGAAAATCAATGATGAAAAGAAGGCCTCCATGGCTGCTCAATTTGCAGCAGAAGCCACTCTTAGAAGGGTTCATGCTGCGCAGAAGGATGACGATATGCCTCCCATTGAAGCGATTCTTGCACCGTTGGAGGCTGAGCTCAAGCTTGCTCGGCAGGAGATAGCAAAGCTGCAGGATGACAACAAAGCACTAGATCGCCTTACCAAATCAAAAGAAGCAGCTTTACTTGAAGCTGAGAGGACTGTTCAGGTTGCATTGGCAAAGGCCTCTATGGTGGATGATCTTCAGAATAAGAACCAAGAGCTGATGAAACAAATAGAAATTTGCCAGGAAGAAAATAAAATTTTGGATAAGATGCATCGCCAAAAGGTTGCAGAGGTTGAAAAACTAACCCAAACTGTAAGGGAGCTTGAAGAGGCTGTTCTGGCTGGTGGTGCAGCTGCAAATGCTGTCAGAGATTACCAACGGAAAGTTCAAGAGATGAATGAGGAAAGAAAAACCCTCGACAGGGAGCTGGCCCGTGCAAAGGTAACTGCAAACAGGGTGGCAGTAGTTGTAGCAAATGAATGGAAAGATGCTAATGACAAGGTGATGCCCGTAAAACAATGGCTAGAGGAACGGCGATTCTTGCAAGGGGAAATGCAGCAACTCAGGGACAAGCTTGCTATAACGGAAAGAACTGCAAAATCTGAAGCACAATTGAAAGAAAAATATCACCTGCGGCTCAAAGTTATTGAAGAGAGTTTGAGAGGATCTTCAAACAGTAACAATCGTTCTACACCAGAGGTAAGAAGTGTGAGCAATGGGCCTTCCCGTCGCCAGTCTCTGGGTGGAGCTGATAACATCTCCAAATTTATCCCCAATGGCTTTTTATCCAAGAGAACACCAACTTCTCAGTTGAGATCATCTCTGTCCTCTGGCAGCAGTTCGGTGTTGAGACATGCTAAAGGGACATCAAAATCATTTGATGGTGGCACAAGGTCATTAGACAGGGGTAAAGTTCTCTTAAATGGAACACTGCCAAATTATGCACTCAACCAATCTTGTGATGCAACCAAGGATATTGAGGTGCATGATGCATGGAAGGGAAATTCGGATGAAAAACCTAATGAGTTTCCAGTAGTGGACACAGAGGATAGTGTCCCAGGGGTGTTATATGATATGCTGCAAAAAGAGGTCGTTTCTTTGAGGAAAGCTGGTCATGAAAAAGATCAAAGCCTCAAAGATAAGGATGATGCTATTGAGATGCTAGCTAAGAAGGTAGATACATTAACCAAGGCAATGGAAGTTGAGGCTAAGAAGATGAGAAGGGAAGTTGCTGCCATGGAGAAGGAGGTAGCTGCCATGCGTGTGGAGAAAGATCATGAAAATAGGGCCAAGAGATTTGGCAGTTCCAAGGGACCTGTGTCTAACACTCAGCTGCTTCCTGGGAGAAACATAGCACGAGGAGGATTAACAAGGAGCACGCAATAG 1914 0.466 MAEISGDIASVSPVELSYSENGGNGGRPPANEAVYVVSTPPLTVSQSFKEGKGSSRRRASVRPSLDADEFINLLHGSDPVKVELNRLENEVRDKDRELGEAQAEIKALRFSERLREKAVEEITEELSKVEEKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNKALDRLTKSKEAALLEAERTVQVALAKASMVDDLQNKNQELMKQIEICQEENKILDKMHRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAITERTAKSEAQLKEKYHLRLKVIEESLRGSSNSNNRSTPEVRSVSNGPSRRQSLGGADNISKFIPNGFLSKRTPTSQLRSSLSSGSSSVLRHAKGTSKSFDGGTRSLDRGKVLLNGTLPNYALNQSCDATKDIEVHDAWKGNSDEKPNEFPVVDTEDSVPGVLYDMLQKEVVSLRKAGHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRVEKDHENRAKRFGSSKGPVSNTQLLPGRNIARGGLTRSTQ* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0563 637 MobiDBLite consensus disorder prediction 396 425 - -
Vvi1g0563 637 Coils Coil 239 287 - -
Vvi1g0563 637 MobiDBLite consensus disorder prediction 602 637 - -
Vvi1g0563 637 MobiDBLite consensus disorder prediction 396 472 - -
Vvi1g0563 637 MobiDBLite consensus disorder prediction 1 32 - -
Vvi1g0563 637 Coils Coil 119 153 - -
Vvi1g0563 637 Coils Coil 84 104 - -
Vvi1g0563 637 MobiDBLite consensus disorder prediction 611 637 - -
Vvi1g0563 637 Coils Coil 572 599 - -
Vvi1g0563 637 Coils Coil 298 325 - -
Vvi1g0563 637 Coils Coil 187 214 - -
Vvi1g0563 637 MobiDBLite consensus disorder prediction 435 472 - -
Vvi1g0563 637 Pfam Microtubule-associated protein 70 68 620 IPR009768 GO:0007010|GO:0008017
Vvi1g0563 637 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 63 617 IPR009768 GO:0007010|GO:0008017
Vvi1g0563 637 Coils Coil 347 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0563 Vvi-Chr1 5560160 5566715 Dispersed