Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0561 ATGTTAATTTCACTCGTTTGTTTGTCTCAGTTCTTATTTGTTCTATTCGTCTTCCTGTCAAGCTATTTTTTTGGTTTCTATATTGCAGTTATAGCAGTGGACCTGAAGCAGACTGTGCAGGTTGATAAGGATCTTCAGATCCGTGCCTACTATGCAGGACATGTTCTTGGGGCTGCAATGTTTTATGCAAAGGTTGGAGATGCTGCTATGGTGTATACAGGGGATTATAATATGACACCAGATAGGCATCTTGGAGCTGCTCAAATTGATCGATTACAGTTGGACCTTCTTATAACAGAGTCAACATATGCAACCACTGTTCGTGATTCAAAGTATGCTCGTGAGAGGGAATTTCTTAAAGCAGTTCACAAATGTGTAGCCGATGGAGGAAAAGTGCTAATTCCTACATTTGCTCTTGGAAGAGCTCAGGAACTTTGTATACTGTTGGACAATTATTGGGAGCGCATGAATCTAAAGGTTCCAATTTACTTTTCGGCAGGCTTGACCATTCAAGCTAATATGTACTATAAAATGCTTATCAGCTGGACCAACCAAAGAGTCAAGGAGACATATGCCACTCACAATGCATTTGATTTTAAAAATGTTCGGAGTTTTGACCGCTCTCTTATAAATGCTCCTGGACCCTGTGTTCTCTTTGCCACACCCGGGATGATCAGTGGTGGTTTTTCTCTTGAGGTTTTTAAGCTTTGGGCTCCATCTGAAATGAATCTTGTTACACTACCTGGGTAA 750 0.408 MLISLVCLSQFLFVLFVFLSSYFFGFYIAVIAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTVRDSKYAREREFLKAVHKCVADGGKVLIPTFALGRAQELCILLDNYWERMNLKVPIYFSAGLTIQANMYYKMLISWTNQRVKETYATHNAFDFKNVRSFDRSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPG* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0561 249 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER 30 249 - -
Vvi1g0561 249 SMART Beta_Casp_2 142 249 IPR022712 -
Vvi1g0561 249 Pfam Metallo-beta-lactamase superfamily domain 35 90 IPR001279 -
Vvi1g0561 249 Pfam Beta-Casp domain 142 249 IPR022712 -
Vvi1g0561 249 FunFam Cleavage and polyadenylation specificity factor subunit 3-II 110 249 - -
Vvi1g0561 249 SUPERFAMILY Metallo-hydrolase/oxidoreductase 30 249 IPR036866 -
Vvi1g0561 249 Gene3D - 30 109 IPR036866 -
Vvi1g0561 249 Gene3D - 110 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0561 Vvi-Chr1 5515058 5545366 Dispersed