Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0552 ATGGTTTGTGTAGTTTCTCGCACGGGAAGGGAGCTGCAACGTTACGACCAAGGCCGACGCCTGGTTGTGGGATGCATTCCATACAGATATAAAAGCGGGAGTGATGGCTCCATCAAGGACGAATTAGAGGTCCTTGTGATCAGTTCGAAGAAAGGCCAAGGAATGATGTTCCCCAAGGGAGGTTGGGAAACTGACGAATCCGTGGAAGAAGCAGCTTCCCGGGAGTCCCTTGAAGAAGCGGGCGTTCTAGGCAAAGTGGGGTGTGAATTGGGGCAATGGAGCTTCATGAGCAAAAGATACGGGACGTTTTATGAAGGGTACATGTTCCCTTTGCTTGTAAAGGAGCAACTTGATCTGTGGCCGGAGAAGGATGAGCGGCAAAGAATATGGATGGATGTGGCGGAAGCAAGAGAAGTTTGTCAGCATTGGTGGATGAAAGAAGCTCTAGACGTATTAGTTCGTCGGCTCACGACTCTGCCACGACACCCACAAGAAGATGTTCTCTGA 507 0.503 MVCVVSRTGRELQRYDQGRRLVVGCIPYRYKSGSDGSIKDELEVLVISSKKGQGMMFPKGGWETDESVEEAASRESLEEAGVLGKVGCELGQWSFMSKRYGTFYEGYMFPLLVKEQLDLWPEKDERQRIWMDVAEAREVCQHWWMKEALDVLVRRLTTLPRHPQEDVL* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0552 168 ProSitePatterns Nudix box signature. 60 81 IPR020084 GO:0016787
Vvi1g0552 168 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 155 - -
Vvi1g0552 168 FunFam Nudix hydrolase 17, mitochondrial 5 155 - -
Vvi1g0552 168 ProSiteProfiles Nudix hydrolase domain profile. 18 153 IPR000086 -
Vvi1g0552 168 Pfam NUDIX domain 43 146 IPR000086 -
Vvi1g0552 168 SUPERFAMILY Nudix 9 159 IPR015797 -
Vvi1g0552 168 CDD Nudix_Hydrolase_9 21 146 IPR047198 GO:0016462
Vvi1g0552 168 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0552 Vvi-Chr1 5374629 5375670 Dispersed/Transposed