Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0550 ATGTCTATCAGCCTTGCCTCCAATTTCTTTACGTTATCTTCGCACATTCGGACAAGGTCCAAGAAGGAGAAGGCTCAACCTACAACTGCAGTTACGCTAATGATGGCCGCCAACGGCGATATTCACTACGATCGAGCCAAAGAAGTCAAGCAGTTCGACGAATCCAAAATCGGCGTCAAAGGTCTCGTCGACTCCGGCATCACCACTATCCCCCGAATCTTCATCCACCCAACCGAAACTATTTCCGACCTCAAATCCTCTAACCCATCCGGTTCCCATTCAATCCCCGTCATTTCCCTCTCCGGCGACCGCTCCTCCGTCGTCGACCAAATCAGGCGCGCCTCCGCCGAATTCGGCTTCTTCCAGATCATCAACCACGGCATCTCCACCGACGTCCTCGACCGCACGGTCGCCGCCATCAGGGCCTTCAACGAGCAGCCAACGGAGGTTAAGGCGCAGTACTACCGGCGGGATATTGGAACGGGAGTGGCGTTCTCGACTAACTTCGACTTGTATCACTCCAAGGCGGCGAGCTGGAGAGACACGCTTCAGGTGAGGCTGGGGCCGACACCTACGGAGTTCGATAAGATGCCTGAGGTGTGCCGCAGGGAAGTGATGGAGTGGGACCGTGAGATGGTGAGGCTGGGAGAGGCGTTGATGGGATTGATGTGCGAAGGGCTGGGGTTGGATGCGGGAAGATTGAAGGAGCTGACGTGTTTGGAAGGAAGAATTATGGCGAGTCACTACTATCCGTACTGTCCTCAGCCTGAATTGACGATGGGGCTCACCCCCCACACAGATCCGGGAGTGTTAACGGTGGTACTGCAGAATCAGGTAGGTGGGTTGCAGGTTAAGCACGATGGGGCATGGCTGGATTTGAACCCTGTGCCCGGTGCTCTCGTCATCAACGTGGGCGATATGCTTCAGGTAATGAGCAATGATGAATACAAAAGCGTGGAGCATAGGGTGGCGGGGAACCCATGTCGGGAAGCAAGAGTTTCAATTGCAGTTTTCTTCAATCCGGGCGATAGGCATTCCTTGTTTGGGCCATTGCCGGAGCTCATATCAGCAGAGAAACCAGCTGTGTACAAGAGCTTCACATTCGATGAGTTTATGACAAGGTTCTTTACTAAGGAGTTGGATGGTAAGTCTTTGATAAATTTCTTTAAACTCTCACAATGA 1182 0.5305 MSISLASNFFTLSSHIRTRSKKEKAQPTTAVTLMMAANGDIHYDRAKEVKQFDESKIGVKGLVDSGITTIPRIFIHPTETISDLKSSNPSGSHSIPVISLSGDRSSVVDQIRRASAEFGFFQIINHGISTDVLDRTVAAIRAFNEQPTEVKAQYYRRDIGTGVAFSTNFDLYHSKAASWRDTLQVRLGPTPTEFDKMPEVCRREVMEWDREMVRLGEALMGLMCEGLGLDAGRLKELTCLEGRIMASHYYPYCPQPELTMGLTPHTDPGVLTVVLQNQVGGLQVKHDGAWLDLNPVPGALVINVGDMLQVMSNDEYKSVEHRVAGNPCREARVSIAVFFNPGDRHSLFGPLPELISAEKPAVYKSFTFDEFMTRFFTKELDGKSLINFFKLSQ* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0550 393 Pfam non-haem dioxygenase in morphine synthesis N-terminal 95 187 IPR026992 -
Vvi1g0550 393 Pfam 2OG-Fe(II) oxygenase superfamily 245 341 IPR044861 -
Vvi1g0550 393 SUPERFAMILY Clavaminate synthase-like 56 383 - -
Vvi1g0550 393 Gene3D - 49 373 IPR027443 -
Vvi1g0550 393 FunFam DIBOA-glucoside dioxygenase BX6 50 373 - -
Vvi1g0550 393 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 88 369 - -
Vvi1g0550 393 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 235 341 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0550 Vvi-Chr1 5367687 5368963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0550 35 391 Glycosyltransferase AT5G59530 41.848 3.49e-102 305