Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3193 ATGTCTTCCTCAAATTCCGCCCCTCAGCCCCACGCGCCGCTGCTCATCCCGCGTCCCGATGCCGGCACGGCCCGTCTCCCCGTCCTCGCACTCCTCCTCGGCCGCCGTGGCCATTCCGCCGTCGTCCGGGAGACCGCGGCCCGTGAGCTCGACGAGCGCCGCGCCGACTGGACATACTCGAAACCGGTGGTGGCGCTCGACATGACATGGAACATGGCCTTTGTGGTGGTCTCGGCGGTGATGCTCGCCTGCACCGTCAAGGAGAATCCCAACACGCCGATCCGGTGGTGGATCTGTGGCTACGCCCTGCAGTGCCTCCTTCACGTGGCGCTCGTGTGGGTCGAGTACCGGAGGAGGAGCGACGCGCCGAGGGACGAGGAGTCTGGCGGCCACCTCGAATATGATGACGTCAACGACAGCGAAGAGGAGGATGCTGGAACCTCTGGGAGTTCCCCTTCCACTGGATTCACAAAACGGTGCGCATCATTGAATACCATGGTTTCGTTACTTTGGTGGATGGTGGGCTTTTACTGGGTTGTCTCTGGTGGTGATATTCTTCTGCAAGATGCTCCACGTTTGTACTGGTTGGCTGTTGTCTTCCTTGCATTTGATGTCTTTTTTGCCATCTTTTGTGTTGTGTTGGCATGCTTGATTGGAATTGCCCTCTGTTGTTGTTTACCCTGTATTATTGCTATTCTCTATGCTGTTGCAGGACAGGAAGGTGCATCAGAATCGGATCTCAGTGTACTTCCAAGATACAAATATCAAATGTTAAGCAATGAGGAAACACCCAGTAAAGGAGGTGGATCAATGATTCCCGTGGAGACGATCAGTGGTTACTCAGTGAATGAACGAATACTTTCACCTGATGATGCAGAATGCTGTATATGCATCTCTTCCTATGAGGATGGAGCAGAGCTTCATGTTCTTCCGTGTAACCATCATTTCCATTCTACATGCATAGTGAAATGGCTGAAGATGAATGCAACTTGTCCTCTTTGCAAGTTCAATATTCTGAAGGGAAATGAACAGGTGTGA 1038 0.5289 MSSSNSAPQPHAPLLIPRPDAGTARLPVLALLLGRRGHSAVVRETAARELDERRADWTYSKPVVALDMTWNMAFVVVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALVWVEYRRRSDAPRDEESGGHLEYDDVNDSEEEDAGTSGSSPSTGFTKRCASLNTMVSLLWWMVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSVLPRYKYQMLSNEETPSKGGGSMIPVETISGYSVNERILSPDDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGNEQV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3193 345 MobiDBLite consensus disorder prediction 122 155 - -
Vra7g3193 345 Pfam Ring finger domain 293 335 IPR001841 -
Vra7g3193 345 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 345 - -
Vra7g3193 345 CDD RING-H2_PA-TM-RING 293 335 - -
Vra7g3193 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 343 IPR013083 -
Vra7g3193 345 PANTHER TARGET OF ERK KINASE MPK-1 1 345 - -
Vra7g3193 345 SUPERFAMILY RING/U-box 284 339 - -
Vra7g3193 345 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
Vra7g3193 345 SMART ring_2 294 334 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3193 Vra-Chr7 51595619 51599380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3193 4 344 C3H Transcription Factor Family AT1G68070 65.507 1.16e-162 456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3193 7 51595619 51599380 Vra7g3193 7 51595619 51599380 ECH