Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3178 ATGCATCGCCTCCTTCTCCTCTTCATCTTCTCCGTCCTCGCAACCCCATCTTCCTCCGCCATCGACACCTTCGTCTTCGGCGGTTGCTCCCAGCCCAAGTACACGCCGGGTTCGCCCTACGAGAGCACCGTAAACTCGCTCCTCACCTCGCTCATCAACTCGGCCTCCTTCGCCAACTATAACAACTTCACCCTTGCCGCCGCCTCCTCCGACACCGTCTACGGCCTCTTCCAGTGCCGCGGCGACCTCAACAACGACCAGTGTTCGCGCTGCGTGGCGCGTGCGGTCACTCAGCTCGGCACGCTCTGCTTCGCCTCCTGCGGCGGCGCGTTGCAGCTCGAGGGCTGTTTCGTGAAGTACGACAATGCGACGTTTGTCGGAGTGGAGGACAAGACGGTGGTGACCAAGAAATGTGGGCCGTCCGTTGGGTTGACCTCGGACGCGTTGACTCGGAGGGACGCTGTGCTAGCGTATTTGCAGACGCCCGATGGGACTTACAAGACCTTCAGGACCAGCGCGTATGGGGATTTTCAGGGTGTGGCGCAGTGCACCGGTGACTTGAGTCCCACCGAGTGCCAGGATTGTCTCTCCAGTGCCATCCAACGGCTCAAAACCGACTGTGGGCCCTCCCCCTGGGCAGAGATTTACCTCGCCAAATGCTACGCGCGCTACTCCCAGGGTGGCTCTCACTCGCGCCCTAATAATAACGATGACAGCAATCACAATGATGATGAGATCGAGAAGACACTCGCCATACTGATTGGACTCATTGCCGGTGTTGCTCTGATTATCGTTTTCCTTTCCTTCTTGTCCAAAGTGTGCGAAAAGCAGAAAGGTGGTAAATAA 846 0.5792 MHRLLLLFIFSVLATPSSSAIDTFVFGGCSQPKYTPGSPYESTVNSLLTSLINSASFANYNNFTLAAASSDTVYGLFQCRGDLNNDQCSRCVARAVTQLGTLCFASCGGALQLEGCFVKYDNATFVGVEDKTVVTKKCGPSVGLTSDALTRRDAVLAYLQTPDGTYKTFRTSAYGDFQGVAQCTGDLSPTECQDCLSSAIQRLKTDCGPSPWAEIYLAKCYARYSQGGSHSRPNNNDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKQKGGK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3178 281 ProSiteProfiles Gnk2-homologous domain profile. 130 229 IPR002902 -
Vra7g3178 281 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 278 - -
Vra7g3178 281 Gene3D - 147 227 IPR038408 -
Vra7g3178 281 Gene3D - 21 125 IPR038408 -
Vra7g3178 281 ProSiteProfiles Gnk2-homologous domain profile. 22 125 IPR002902 -
Vra7g3178 281 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 4 278 - -
Vra7g3178 281 Pfam Salt stress response/antifungal 29 122 IPR002902 -
Vra7g3178 281 Pfam Salt stress response/antifungal 168 226 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3178 Vra-Chr7 51476512 51479165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3178 4 224 Receptor kinase-like Gene Family AT4G05200 27.234 9.29e-15 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3178 7 51476512 51479165 Vra7g3178 7 51476512 51479165 ECH