Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0982 ATGCCCATACATACCCTATTTTTTAGCACTCTTTCTCTCTCTCCATTCCTATTGCGACTCTCTTCTCTCTCCTCTCTCTTCGCCTTTCTCTTTCTCTCTCTTTCAGATTTCTGTCTCTCTCATCTTTCTCTCTCCGGAAGGGCAAACCCTAAAGACCGTTTGCACCCACCAATTGCCATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAACCCTTCAGAGGGGGACATCTTGGTCTGCAGCTCATGCCTGGTATGACTGATCGAGACACCAAGCCGTATTTGCCTGCTCGTGATCCATCTGTGTTAATGGGTGCTAGTGGAACTTTTCACCCTAGAGATTGCGTTGTTTCCGAAGCACCAATGCAGTTAAACTATGTCAGAGATAATTGGACAAGCCAAAGGGATAGGTATTTCAGTATGCAGCAGCCCACAAATCCTAATTATGCTGTTCTTCCTGAAACATCAGTAGCTCCCAACTTGCAAATTATACAACCACCTGATACATCCAGAGATGAGAAAGTGGATAGAATTGAAGAGTTAGTTGTCAAAAAGGAAGGTGGTCAGTCAAAGAAAAGGCAGACTAAGGGTGCTCTGACGACCCCAAAAGCTAAGAAACCTAGGAAGCCGAAGGATAATGGCAATGTTCCAGTTCAACGTGTGAAGCCCCCGAAGAAGACTATGGAGCTTGTAATTAATGGAATTGATATGGACATTTCTGGTCTGCCCATTCCAGTTTGTTCGTGTACCGGGAGTCCTCAGCAGTGTTACCGTTGGGGTTGTGGAGGTTGGCAATCGGCCTGTTGCACCACAAATGTGTCGATATATCCTTTGCCAATGAGCATGAAAAGGCGTGGTGCTAGGATAGCTGGGAGGAAAATGAGCCAAGGTGCCTTTAAAAAGGTTTTAGAGAAACTTGCGGCTGAAGGATATAATTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCCAGACATGGCACGAACAAGTTTGTTACTATCAGGTAG 1017 0.4513 MPIHTLFFSTLSLSPFLLRLSSLSSLFAFLFLSLSDFCLSHLSLSGRANPKDRLHPPIAMDDDVLNMPNWGYYEPFRGGHLGLQLMPGMTDRDTKPYLPARDPSVLMGASGTFHPRDCVVSEAPMQLNYVRDNWTSQRDRYFSMQQPTNPNYAVLPETSVAPNLQIIQPPDTSRDEKVDRIEELVVKKEGGQSKKRQTKGALTTPKAKKPRKPKDNGNVPVQRVKPPKKTMELVINGIDMDISGLPIPVCSCTGSPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0982 338 MobiDBLite consensus disorder prediction 186 225 - -
Vra7g0982 338 SMART GAGA_bind_2 60 338 IPR010409 -
Vra7g0982 338 PANTHER - 60 338 IPR010409 -
Vra7g0982 338 Pfam GAGA binding protein-like family 60 338 IPR010409 -
Vra7g0982 338 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 60 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0982 Vra-Chr7 23662926 23664890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0982 60 338 BBR or BPC Transcription factor family AT2G01930 55.369 2.71e-103 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Vra7g0982 GAGA_bind 9.6e-103 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0982 7 23662926 23664890 Vra7g0982 7 23662926 23664890 ECH