Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1400 ATGGGTTCATTCCAGACACCAATTGGAATGAGAAGTTCCACATTGCTGGAGACTTCGTGTGGGTTCCTGTTACAGGAACTGCAGATTATATGGGATGAAGTTGGAGAAGATAAGTTCGAAAGGGAGAAGGTTCTTCTGGATTTGGAGCAGGAGTGCCTTGAGGTTTACAGAAGAAAAGTTGATAGGGCCAATATATCCAGAGCTTGTCTGCATCAGGAAGTGGCCGAGGCAGAGGCTGAATTTACTCACCTTCTTTTGTCCCTTGGTGAACGATCTCTACCTGGACGGCCGGAGAAAAGAGCAGGTTCACTGAAAGAGCAGCTAGATTCAATCACCCCAGCACTCCAAGAAATGCGGTTGAGGAAAGAAGAGAGGCTAAACCAGTTCCGAGCTGTGCAAGGTCAAATTCAAAAAATTTCTGCAGAAATTGCTGGTAACTCAGACAAGGAACCGTCAACTATTATTGTAAATGAGAATGATCTTTCACTAAAAAGACTTGAGGAGTATCAGAATGAGTTGCAAAGGCTCTACAACGAGAAGAATGAAAGACTTCAGCAAGTGGAGAAATACATAGACATGATACACAGCTTGTCCACGATCTTGGGAAACGATTCTTCTGCAATCATCATGGAAGTTCACCCAAGCTTAAATGATTTGTGTGGAATAACAAAAAATATAAGTGACACTATCTTAGATAAACTCAATATCACAGTGGAGTCCCTCTTTGAAGAAAAGAAAAATCGACTGGACAAGCTTCACCATTTAGGCAAAGCACTTTCAAATCTGTGGAACCTTATGGACACACCATATAGTGAGCGACACCCATTTTCTCATGTAATCCATCTGTTGTCACTCTCATCAGCAGAAGTAACAGACCCGGGAAGTCTTACTCTAGAAATAGTCCAGCAGACTGAAGCTGAAGTCAAGAGACTGGATCAACTAAAAGCAAGCAAAATGAAGGAGCTATTCCAGAAGAAGCAGGAGGAGCTGGAGTTGATATGCAAGAAATCACATGTGGAGATTCCTTCAAGGGAAGAGATGAACAATATCATTAACCTCATAAACTCAGGGGAGATTGATCATTCTGATCTCCTCTTGAGCATGGATGAACAGATATCTAGAGCAAAAGAAGAGGCTTCTAGCAGGAAGGCTATCATGGAGAAAGTGGAGAAGTGGATGCTGGCACGTGATGAAGAGCGCTGGCTAGAAGAATATAGCAGGGATGAGAATCGATACTCAGTCAGTAGAGGAGCTCACAAAAACTTGAGACGTGCTGAACGAGCCCGCATAATGGTCAGCAGAATACCAGCTTTGGTAGATATGCTAATAAAAATGACCAGAAGTTGGGAAGAAGAAAGAAACAAAGTTTTCTTGTATGATCAGGTACCTCTGATGGCTATATTGGAAGAATATAATGTACTACGACGAGAAAAAGAGGAGGATATGAAAAGACAGCAGCCCTGGGAAAAAAAGAGGATTCAAATCCAAGTAGTTGAGCGAGAAAATACTTATACGTCAAGACCCAGCACCAGCAGCAGACGTCTTCCAAGTAGAAGCTTGAATGGAGCTTTAGACAGTTCTGTGATCATGAACAAAAGGCTTTCTATGGGAATCCATCAGCTGCCACCCAACACCATAAACTCAGGAAATCAAGGCGTGTCCTTCATTAAGGATGGAAGCAATGCCCTAAGGAAAAAGATTTTTGGCGACCCTGCTTTTACCTCTCAAATGCGATGA 1737 0.426 MGSFQTPIGMRSSTLLETSCGFLLQELQIIWDEVGEDKFEREKVLLDLEQECLEVYRRKVDRANISRACLHQEVAEAEAEFTHLLLSLGERSLPGRPEKRAGSLKEQLDSITPALQEMRLRKEERLNQFRAVQGQIQKISAEIAGNSDKEPSTIIVNENDLSLKRLEEYQNELQRLYNEKNERLQQVEKYIDMIHSLSTILGNDSSAIIMEVHPSLNDLCGITKNISDTILDKLNITVESLFEEKKNRLDKLHHLGKALSNLWNLMDTPYSERHPFSHVIHLLSLSSAEVTDPGSLTLEIVQQTEAEVKRLDQLKASKMKELFQKKQEELELICKKSHVEIPSREEMNNIINLINSGEIDHSDLLLSMDEQISRAKEEASSRKAIMEKVEKWMLARDEERWLEEYSRDENRYSVSRGAHKNLRRAERARIMVSRIPALVDMLIKMTRSWEEERNKVFLYDQVPLMAILEEYNVLRREKEEDMKRQQPWEKKRIQIQVVERENTYTSRPSTSSRRLPSRSLNGALDSSVIMNKRLSMGIHQLPPNTINSGNQGVSFIKDGSNALRKKIFGDPAFTSQMR* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1400 578 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 8 577 IPR007145 GO:0000226|GO:0008017
Vra2g1400 578 Gene3D - 372 506 - -
Vra2g1400 578 Coils Coil 301 321 - -
Vra2g1400 578 Coils Coil 60 80 - -
Vra2g1400 578 MobiDBLite consensus disorder prediction 500 519 - -
Vra2g1400 578 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 8 8 577 - -
Vra2g1400 578 Coils Coil 159 190 - -
Vra2g1400 578 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1400 Vra-Chr2 22218362 22222870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1400 12 555 EF-hand Containing Proteins AT5G62250 37.071 9.03e-95 298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1400 2 22218362 22222870 Vra2g1400 2 22218362 22222870 ECH