Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1314 ATGCCTGAGGCACCAAGGGACTACAACCTTGTTGAGCAAAACGAGAAAATTCTCGACTTCATTGAGGATGTCACCGCCAACGCCGACCAAGTTCAGAAGAGGGTCCTCTCCGAAATCCTCTCCAACAATGCAAACGTTGAGTACTTGAAGAGACACGGTCTCCACGGCCAGACAGACCGTGAAACTTTCAAGAAACTCTTGCCTGTCATAACCTACGAGGATATCCAACCTGACATCAACCGCATCGCCAATGGTGACACTTCTCCAATCCTTTGCTCCAAACCCATCTCAGAATTTCTCACTAGTTCTGGTACATCAGGAGGTGAGAGGAAGCTGATGCCTACAATTGAAGAGGATCTAGGGAGGAGGAGTTCACTTTATGGGCTTCTGATGCCAGTGATGAGCCTGTTTGTTCCTGGTTTGGAAAAGGGCAAAGGAATGTACCTAATGTTCATAAAATCGGAGGCCAAAACACCTGGAGGGATTGTGGCTCGTCCAGTTCTGACCAGCTACTACAAAAGTTCCTATTTCAAAGACAGACCCTATGACCCCTACACCAACTACACCAGCCCGAATGAGACTGTCCTCTGCCCTGACTCCTACCAAAGCATGTATTCCCAACTCCTTTGTGGCCTTTGCCAAAACAAAGAAGTTTTCCGTGTGGGGGCAGTTTTTGCCTCTGGCTTCATAAGAGCCATTAGGTTCCTTGAGAAGCACTGGTCCCTCCTTTGCAACGACATCAGAACTGGAACCATCAACTCTCAGATCACTGACACCTCCGTCCGTGAGGCTGTCATGAAGATCCTCAAACCTGATCCTAAGCTCGCGGATCTTATCCAGACTGAGTGTAGCAAGAGCTCATGGCAGGGCATAATCACTAGGCTGTGGCCAAATACTAAGTATGTGGATGTTATTGTGACCGGGACAATGTCACAGTACATCCCCACATTGGACTACTACAGCAATGGACTCCCGCTTGTGTGCACCATGTATGCTTCCAGTGAGTGCTATTTTGGTGTTAACCTAAACCCTCTTTGCAAACCCAGTGAGGTCTCTTACACCCTTATTCCCACCATGTGCTACTTCGAGTTCTTGCCTGTTAACCGAAGCAATGGAGTCAATGACCCTCTCCACACCCCCAGATCCCTCAATGAGAAACAACAGCAGGAGCTGGTTGAGCTCGTTGATGTCAAACTTGGCCAAGAATATGAACTCGTTGTCACGACTTACGCTGGATTGTATCGTTACAGAGTTGGTGATGTGCTGAGGGTGGCTGGATTCAAGAACAAGGCACCCCAATTCAACTTTGTGTGCAGAAAGAACGTGGTGTTGAGCATAGACTCAGACAAGACAGATGAGGTGGAGCTTCAGAACGCAATGAAGAATGCTGTGACACACTTGGTGCCCTTTGATGCATCAGTGTCTGAATACACAAGCTATGCAGACACCACAACGATCCCTGGGCACTATGTGTTGTACTGGGAGCTGACCCTGAAAGGTTCAACCCCAATTCCACCGTGTGTGTTTGAAGACTGTTGCCTAACCATAGAGGAATCACTGAACAGTGTGTATCGGCAAGGGAGAGTCTCAGACAAATCAATTGGGCCCCTTGAGATAAAGATTGTGGAACAGGGGACTTTTGACAAGCTGATGGACTATGCCATAAGTCTAGGAGCTTCAATAAATCAGTACAAAACTCCAAGATGTGTGAAGTTTGCACCTGTGGTGGAGCTCTTGAACTCAAGGGTGGTGGAAAAATATTTTAGCCCCAAATGTCCAAAATGGGTTTCCGGCCACAAGCAGTGGATCAATCAGAATTGA 1821 0.4767 MPEAPRDYNLVEQNEKILDFIEDVTANADQVQKRVLSEILSNNANVEYLKRHGLHGQTDRETFKKLLPVITYEDIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEDLGRRSSLYGLLMPVMSLFVPGLEKGKGMYLMFIKSEAKTPGGIVARPVLTSYYKSSYFKDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVFRVGAVFASGFIRAIRFLEKHWSLLCNDIRTGTINSQITDTSVREAVMKILKPDPKLADLIQTECSKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRSNGVNDPLHTPRSLNEKQQQELVELVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAMKNAVTHLVPFDASVSEYTSYADTTTIPGHYVLYWELTLKGSTPIPPCVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRVVEKYFSPKCPKWVSGHKQWINQN* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1314 606 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 603 IPR004993 -
Vra2g1314 606 PANTHER BNAC03G14570D PROTEIN 7 603 - -
Vra2g1314 606 Pfam GH3 auxin-responsive promoter 21 571 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1314 Vra-Chr2 20869079 20871936 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1314 9 589 EF-hand Containing Proteins AT1G23160 49.661 0.0 581