Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1270 ATGGTGGGCTCAGGAACAGCAACAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCACGAGGCCCTCAGAACTGTGTGTCTCAACTCAGATTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGACCAAGAGTGAGAGGTGGCAATGGGTGCAAGGTTGGGGATGATAACGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGTTTCAGATTGTTTGGAAGAGATTGATGGAGAGGATCCTATCAGGAAATCTTTCAGCAAAATGTCGATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTACATCTGATAAGTGCCACAAATGGGTCTTCAAAGAGCCTACGGAGTGTGAGCCTAATATGACCAACTACTGGCAAAGCTCCTTTGATGCTCTACCTCCTGAATGGATAGAACAGTTTGAGTCAGGCATTCAGACAATCGCTGTGATTCAAGCTGGGCATGGCCTTCTGCAGCTTGGTTCTTGCAAGATTATTCCTGAAGACCTTCATTTTGTGCTAAGAATGAGACACACTTTTGAATCTCTAGGCTACCAATCAGGATTCTACCTCTCACAACTCTTCTCTTCAACTAGGAGCACTTCCTCTTCTACCTCCCTTCCTTCAAAACCATCCACCATTCCAATCAGGCCACCCCCTCCATCCCTCAACTGGGGTCAGAGGCCAATTGGGTCTGCTACTTCATTGCTACCCTCTCCAACTTTTCAACATGCAGCCAGAATGGGGTTCCCACAGGCCAAAGATGAAACTCAGATGTTCCTCATGCCTCATGCATCATCAGAGCATGTGAGAATGGGAGACATGATGAGGGAGCATGAGAATGACATAAAGTGGCCAAATGGATTATCTATCTTCAATGTACTCACCGGAAGATCTGATGATGCTAAACTCTTGTTCAATCAAGAGAGTGCAAATCCAACCTCAGCAGTGCAGAATGCTAGTGTGGCAAACCCAAATGAGTTCTTGAGCTTGGATGGCCAATCTGAAGGGACAAGGAAAGTGGACAAGTTCAAGAGGTGCTTCACTCTACCTGCCAAAGTGGTTTCATCTTCATCCTCTACTTCAATGGATCACCATCATCAACAAGCAAGTGGAGAGTATAGGAATTCAGGTGGCACGTACCAGGATGTCATGGAGACCTTTTTGGAGTGA 1197 0.4637 MVGSGTATDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEIDGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTECEPNMTNYWQSSFDALPPEWIEQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRSTSSSTSLPSKPSTIPIRPPPPSLNWGQRPIGSATSLLPSPTFQHAARMGFPQAKDETQMFLMPHASSEHVRMGDMMREHENDIKWPNGLSIFNVLTGRSDDAKLLFNQESANPTSAVQNASVANPNEFLSLDGQSEGTRKVDKFKRCFTLPAKVVSSSSSTSMDHHHQQASGEYRNSGGTYQDVMETFLE* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1270 398 MobiDBLite consensus disorder prediction 208 231 - -
Vra2g1270 398 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 89 188 IPR025610 -
Vra2g1270 398 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 76 IPR025610 -
Vra2g1270 398 PANTHER GB|AAF34833.1 1 398 - -
Vra2g1270 398 MobiDBLite consensus disorder prediction 365 387 - -
Vra2g1270 398 PANTHER GB|AAF34833.1 1 398 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1270 Vra-Chr2 18361351 18364786 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1270 21 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.395 2.53e-19 88.2