Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra2g1222 | ATGCTGCGATTCCCTAACTTCTTCGCCGTCAACGTCGGTCGCTCTAACCTCCCTCCGCTTCTTCTATCCGTTTCAGCCGCCGCCTCTCCGTCGGGGAGCAGAAACCCGCCGCCGCTCCTGATGGCTTCGCGCGATTCGATGGTGGCGGAGTACGCGAAATCTAACCGCTCGTCGTGCAAGGCGTGCTCCAAAGCCATCGAAAAAAAGAGTTTGAGGTTGGCTTTGGTCTCCAAGGGCAATGGTCCATACGACGTCTTCAAATGGCACCACCTCCATTGCTTCCCTGTAGCCTCTCATTCTCCTTCCTCTCCTCAAGCAATCAAAGGCTTTTCTTCCTTGAAGAGTAGTGAACAAGAAGCTTTGATAAAATTATTTGCTGAAAATGGAAAGTCTGAAGAGAAGGTTCATAAAGCAACAGAAGATGTAGAAAATGAACTTCAAGAGGCTGAGGAACATGATTCAAAGAGAAGAAAGGTTCATAAAGCAACAGAAGATGTAGAAAATGAACTTGTAGAAAATGAACTTCAAGAGACTGAGGAACATGATTCAAAGAGAAGAAAGTTGTGGACACCTGATGTTAAAGCTGCGGTGAGCATTAAATTTTCAGTTTCTGATGTCAACAGCAAATACAAGGATGCTACCCTTCTACCAAAATGGAAGGCTTTCCAGACAGTCATATTTCTGGAACGGGATGATGGTCTGCGTGATTCAAGTAAAATTGCTGCATTTGATTTTGATGGATGTCTTGCAAAAACAGACGTGAAGAGAGTGGGTGCAAATGAATGGACCCTCATGCATTCGACAATTCCGGATAAACTACAGAGCCTATACAATGATGGCTACAAATTGGTAATTTTCACCAATGAATCCAATATTGAACGTTGGAAGAATAAGAGGCAAGTGGCGGTGGACTCAAAAGTTGGACGTCTGAATAATTTTATTGAGAGAGTGAAGGTTCCAATTCAGGTTTTTATAGCTTGTGGGGTTGGTCTGAAATCAGGAGCAGACAAAAAGAATGATGATGCTTTTCGCAAACCCAAACCAGGGATGTGGCATCTTATGGAGGAGCATTTCAACTCTGGCATTGTCATTGATATGGATCAATCCTTTTATGTTGGTGATGCAGCCGGGAGAAAATCAGATCACAGTGATGCAGATATTAAATTTGCAGAGGCCATTGGTTTAAAATTTTATCTCCCTGAAGACTACTTCGCTTGA | 1218 | 0.4351 | MLRFPNFFAVNVGRSNLPPLLLSVSAAASPSGSRNPPPLLMASRDSMVAEYAKSNRSSCKACSKAIEKKSLRLALVSKGNGPYDVFKWHHLHCFPVASHSPSSPQAIKGFSSLKSSEQEALIKLFAENGKSEEKVHKATEDVENELQEAEEHDSKRRKVHKATEDVENELVENELQETEEHDSKRRKLWTPDVKAAVSIKFSVSDVNSKYKDATLLPKWKAFQTVIFLERDDGLRDSSKIAAFDFDGCLAKTDVKRVGANEWTLMHSTIPDKLQSLYNDGYKLVIFTNESNIERWKNKRQVAVDSKVGRLNNFIERVKVPIQVFIACGVGLKSGADKKNDDAFRKPKPGMWHLMEEHFNSGIVIDMDQSFYVGDAAGRKSDHSDADIKFAEAIGLKFYLPEDYFA* | 406 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra2g1222 | 405 | TIGRFAM | HAD-SF-IIIA: HAD hydrolase, family IIIA | 239 | 397 | IPR006549 | - | |
| Vra2g1222 | 405 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 46 | 145 | - | - | |
| Vra2g1222 | 405 | TIGRFAM | DNA-3'-Pase: DNA 3'-phosphatase | 227 | 404 | IPR006551 | - | |
| Vra2g1222 | 405 | CDD | HAD_PNP | 239 | 404 | - | - | |
| Vra2g1222 | 405 | SMART | zf_PARP_3 | 50 | 126 | IPR001510 | GO:0003677|GO:0008270 | |
| Vra2g1222 | 405 | MobiDBLite | consensus disorder prediction | 132 | 168 | - | - | |
| Vra2g1222 | 405 | ProSiteProfiles | Poly(ADP-ribose) polymerase zinc finger domain profile. | 47 | 129 | IPR001510 | GO:0003677|GO:0008270 | |
| Vra2g1222 | 405 | Coils | Coil | 132 | 155 | - | - | |
| Vra2g1222 | 405 | Gene3D | - | 41 | 184 | IPR036957 | GO:0003677|GO:0008270 | |
| Vra2g1222 | 405 | PANTHER | BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE | 43 | 404 | - | - | |
| Vra2g1222 | 405 | MobiDBLite | consensus disorder prediction | 132 | 184 | - | - | |
| Vra2g1222 | 405 | Coils | Coil | 161 | 181 | - | - | |
| Vra2g1222 | 405 | Gene3D | - | 217 | 405 | IPR023214 | - | |
| Vra2g1222 | 405 | SUPERFAMILY | HAD-like | 222 | 404 | IPR036412 | - | |
| Vra2g1222 | 405 | Pfam | Polynucleotide kinase 3 phosphatase | 239 | 404 | IPR013954 | - | |
| Vra2g1222 | 405 | Pfam | Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region | 50 | 124 | IPR001510 | GO:0003677|GO:0008270 |