Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1211 ATGGTTTTGGCAACGTTTATCTCAGCCCTACTTCTAGCTGCATTAGCCTCTAAAATCATTAGACATTGGCTTATGAGAAAGTCTCTATCTTCTGACAAGAGCAACGGGCTTCCTCCAGGCCCACCAAAGTGGCCCATCGTGGGGAACCTCCTCCAATTGGGTCAACTTCCACATAGAGACTTGGCATCTTTGTGTGAGAAATATGGACCCTTAGTGTACCTAAAATTGGGCAACATTGATGCCATCACCACCAATGATCCTAAGATTATACATGAAATTCTTGTTTCCCAAGATGATGTTTTTGCCTCTCGACCACACACTCTTGCAGCAGTTCATTTAGCATATGGGTGTGGTGATGTTGCATTGGCCCCTATGAGCCCTCATTGGAAGCGCATGAGAAGAATTTGCATGGAACACTTGTTAACAACAAAGAGGCTTGAGTCCTTCTCAAAACACCGTTTGGAGGAAGCCCAACACCTTGTCAAGGATGTTATGGACCGGGCCCAAGATGGAAGGCCCATTAACTTGAGGGAGGTTTTGGGTGCTTTCTCAATGAACAATGTGACTAGAATGTTGTTGGGTAAACAATATTTTGGGTCCAAATCTTCAGGCCCACAAGAGGCTATGGAGTTCATGCACATAACCCATGAGTTGTTTTGGTTGTTGGGTGTGATATTTTTGGGTGACTACTTGCCAATGTGGAGGTGGATTGATCCTTATGGATGTGAAAAGAAAATGAGGGAAGTGGAAAAAAGAGTGGATGATTTTCATTCCAAGATTATTGAAGAGCATAGAAAGGCAAGGGAATGTAAGAAGATGAAAACGGAAGAAGGTGATGGAGATATGGATTTTGTTGATGTTTTACTCTCTTTACCAGGTCAAGATGGAAAAGAGCACATGGATGATGTAGAAATCAAAGCCTTAATTCAGGACATGATAGCTGCAGCAACAGACACTTCAGCGGTAACTAACGAATGGGCGATGGCAGAGGTAATAAAACACCCAGACATCCTCGAAAAAGTCCAACAAGAACTGGACACAGTAGTTGGGCGAAACAGAATGGTGTTAGAATCGGACTTGGCGCACCTTAATTACCTGCGCTGCGTCGTACGAGAAACCTTCCGCATGCACCCGGCGGGGCCCTTCCTCATTCCGCACGAGTCTCTCCGGGCCACCACCATCAACGGCTACCACATCCCCGCCAAGACACGTGTGTTCATCAACACTCATGGGCTGGGCCGCAACACGGAGATTTGGGACAACGTGGAGGAGTTCAGGCCCGAGAGACACTGGCCCAGTAACGGCGGTAGGGTTGAGATTAGTCATGGCGTTGACTTCAAGATTCTGCCTTTCAGTGCTGGAAAACGCAAGTGCCCTGGTGCACCGCTTGGGGTGAATTTGGTTTTGATGGCTTTGGCTAGACTCTTTCACTGCTTTCAGTGGACCCCACCCGATGGTTTGAACCCTCAAGAGATTGATACTACAGAAGTTTATGGAATGACTATGCCCAAGGCTAAACCTTTGTTTGCTGTTGCTGTTCCAAGGTTGTCAAACCATTTCTATCAATAA 1569 0.4634 MVLATFISALLLAALASKIIRHWLMRKSLSSDKSNGLPPGPPKWPIVGNLLQLGQLPHRDLASLCEKYGPLVYLKLGNIDAITTNDPKIIHEILVSQDDVFASRPHTLAAVHLAYGCGDVALAPMSPHWKRMRRICMEHLLTTKRLESFSKHRLEEAQHLVKDVMDRAQDGRPINLREVLGAFSMNNVTRMLLGKQYFGSKSSGPQEAMEFMHITHELFWLLGVIFLGDYLPMWRWIDPYGCEKKMREVEKRVDDFHSKIIEEHRKARECKKMKTEEGDGDMDFVDVLLSLPGQDGKEHMDDVEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPDILEKVQQELDTVVGRNRMVLESDLAHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYHIPAKTRVFINTHGLGRNTEIWDNVEEFRPERHWPSNGGRVEISHGVDFKILPFSAGKRKCPGAPLGVNLVLMALARLFHCFQWTPPDGLNPQEIDTTEVYGMTMPKAKPLFAVAVPRLSNHFYQ* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1211 522 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 Pfam Cytochrome P450 38 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 PANTHER CYTOCHROME P450 703A2-RELATED 12 522 - -
Vra2g1211 522 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 SUPERFAMILY Cytochrome P450 38 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 12 522 - -
Vra2g1211 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Vra2g1211 522 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1211 522 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1211 Vra-Chr2 16781231 16783119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1211 1 521 EF-hand Containing Proteins AT1G01280 75.143 0.0 794