Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1403 ATGGATCAACAAAGAGATTTTGTACTTACCCAGATGAGAAAATCTGTTGAGAAGCTTGGTTCTTCTGCAGAGGGGTATGGAGACCATACACTGTTTAGGTTTTTGATTGCTCGATCAATGGAAGTGGAAAAAGCTGCAAAAATGTTTGTGCAGTGGCAGAAGTGGAGGAGTGCCATGGTTCCTAATGGATTTATTTCAGAATCTGAAATTCCAGATGAACTGGAAGCAAGGAAAATCTTCTTGCAGGGTTTGTCTGGAGATAAATTCCCTCTCATGATTGTTCAAACCAACAGACATTTTTCTGCCAAGGATCAGATTCAATTCAAGAAATTTGTTGTATATTTACTGGACAAGACAATTGCAAGTGCTTTCAAAGGAAGGGAGGTAGGGAATGAGAAGTTGATTGGGATTATTGATCTACAAAACATTTCATATAAAAACATTGATGCACGTGGGTTGATCACAGGATTTCAATTTTTACAGAGTTACTACCCTGAACGTTTGGCAAAGTGCTACATTTTGCACATGCCATGGTTTTTTGTGAGTGTTTGGAAACTAGTTTCTCGTTTCCTAGAGAAGGCTACCCTAGAAAAGATTGTAATTGTGACCAATGAGGATGAGACAAGAGAGTTTGTAAGAGAGGTTGGTGAAGAGGTTCTTCCAGAAGTATATGGTGGAAAAGCCAAGCTTGTAGCAATCCAAGATGTTGAATTGGAACCACTGCAAAATGGATCAAACTGA 741 0.39 MDQQRDFVLTQMRKSVEKLGSSAEGYGDHTLFRFLIARSMEVEKAAKMFVQWQKWRSAMVPNGFISESEIPDELEARKIFLQGLSGDKFPLMIVQTNRHFSAKDQIQFKKFVVYLLDKTIASAFKGREVGNEKLIGIIDLQNISYKNIDARGLITGFQFLQSYYPERLAKCYILHMPWFFVSVWKLVSRFLEKATLEKIVIVTNEDETREFVREVGEEVLPEVYGGKAKLVAIQDVELEPLQNGSN* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1403 246 CDD SEC14 71 227 IPR001251 -
Vra11g1403 246 Gene3D - 1 238 IPR036865 -
Vra11g1403 246 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Vra11g1403 246 SMART sec14_4 73 229 IPR001251 -
Vra11g1403 246 SUPERFAMILY CRAL/TRIO N-terminal domain 3 65 IPR036273 -
Vra11g1403 246 PANTHER SEC14 CYTOSOLIC FACTOR-LIKE 1 239 - -
Vra11g1403 246 SUPERFAMILY CRAL/TRIO domain 68 229 IPR036865 -
Vra11g1403 246 Pfam CRAL/TRIO domain 88 226 IPR001251 -
Vra11g1403 246 PANTHER OS03G0850700 PROTEIN 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1403 Vra-Chr11 17008463 17017553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1403 24 222 Acyl Lipid Metabolism Gene Families AT1G55840 22.222 2.93e-13 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1403 11 17008463 17017553 Vra11g1403 11 17008463 17017553 ECH