Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1400 ATGTCTTGGGTTTCTCAAACTACATTGAGAGTTGAAAGCTGCAGCTGCTGCACTTTGGTAGTTTGGCTCACTTGGCTCACTTTTCTGCAAGATATTCTACAAGTAAACCAATCAATTGAAACTATGTGCAAGACAATTCGAATGCATGGATTCCCAGCTACAGTGTCAGCTGAAGAGGTGAGGAAATTTTTGGAACAAAATACAGGCCCTCAAACTGTTCATGCTGTAGAGGTTGAGCAGCTCAAAGAAGAAGATCCTACCACACATGTTAATGTTAAATTTACAGACAAAAAAAGTGTTGAAACAATCTTGCTCTTAGTTACTCAAAACCTATCATACGGTGTCCATGTTTTGAATGCTACAGAAATAGAACGTGACCTTTTGCCAAAGCAGAGAAACTTTTCTCACAGCTTGGATGACATAGCAGTGCACTTTGGATGTCAAACATCCAAGAATAAACTTAGTGTACTATGGGAACATCCAAGTGCTTCAGTCAAATTCGGGTCCAGACTGAGAAAGATGTATATATTTTTCCATTATTTGTCAGTGGATTATAAGCTGCAGATTTCTTCTGAGAGTGTGTCACGTATTGAGCTGCATCACTCAGATGATTTAACCAAGAAACTTCTCCTTTTCCAGTTACGCAACGCTCCTCTGATCTATGAGAAAGATGTATCAAAAAGCAAATATTTTAAGGAGGCTTGTGACAACCATTGGTTTCGAGGAGTAGATTTTACCCCATCATGCAGCATTGGACAATCTTCTACTTTATGTTTTGAGCTTCCAAAAAGTGTTGAAGTTCCAAACTTCAATCAGCACTATCGTAATTATAATGAAGTTGATGACAGTGTCTTTACTCTTGAAAGAAGACACCTTGGTTTCTCTTCTAACTTCAATTTTGTCCCCATTGTGATTCCTCCAGAAGGCTTCAACTTGCCATACAAAATTTTGTTCAAAATCAACTCACTAATTCAGCATGGTTGTCTTCCTGTTCTGGCAATTGATGTCAACTTTTTTCAACTGGTTGACCCTGGAAAAGTAAAGCTTGAATATATAGAAAGTGCCCTGCATAAATTAGATCAAATAAAAGTATGCTGCTATGAACCTGCGCAATGGTTGGAGAAACAATATAAGAAATACTCAGAAAATAGTGCACTTCCAGTATCTAGTACTATTTCATTGGATGATGGGTTGGTCTATGTGCATAGAGTACGAGTAACTCCATCCAAAATATATTTCTGTGGTCCTGAAGTGAACCTTTCTAACCGGGTTTTGCGCAACTATCCTGAAGATACTGATAATTTTCTTCGTGTTTCTTTCCTTGATGAAGACATGGATAAACTTCACTCATCAGATTTGGTTGCGGACATGGACAGAGAAACAAAGCTTCATGAGAGGGTGCTAGCAACACTTAAAAATGGCATAGAAATTGGTGATAAGAAATTTGAGTTTCTTGCCTTCTCACCAAGTCAGTTGCGGGATAACTCTGTGTGGATGGTTGCATCAAGAACTGGACTTACTGCATCTGATATAAGAAAATGGATGGGAGAGTTTCATGAAATTAGAAATGTGGCCAAATATGCAGCAAGGCTGGGCCAATCATTCAGTTCTTCCAGGGAAACAGTGAGCGTTGGCAGACATGAAATTAAAATTATTCCTGATATAGAATTTAGAAGGGGTGAAACCAGATACTGTTTCTCTGATGGAATTGGGAAGATATCTTATGAATTGGCTCAAGAAGTGGCTGAGAAATGTGGTTGTGGGGATAATACTCCATCTGCATTTCAAATCAGATATGGAGGGTACAAAGGTGTTGTTGCTGTTGATCCTACCTCATCAACTAAACTGTCCTTAAGAAAGAGCATGTGCAAGTACAAGTCAGAAAACACAAAATTAGATGTTTTGGCATGGAGCAAATACAAACCTTGTTACCTTAATCGTCAAATAATCGCCCTCTTGTCCACCCTTGGGGTCCAGGACCGAGTCTTCAGAAAGAAACAAAGAGAGGTCCTTAATCAACTTAAAATGTTATCAAGAAGGCCCTTGATGGTATTAGATTATATGTCCACAGGAGAGATTGCAAAGGTTTTAAAGGAAATGCTCATTTGTGGCTTTCATCCAATTAAGGAACCATTTCTCTCCATGATGTTGCAAACATTATATGCATCAAAATTACAGGAATTGCAGCTCAAAACTAGGATACTTGTTAAGAAGGGAAGAGCATTGTTAGGATGCTTGGATGAAACTAGAACTCTAAAATATGGAGAGGTATTTGTGCAGATAGCTCACCAAAGAAATAAGCAAAATCTTGCTATGTCCTCTCTTTCTTCTAACAGAAATGCATCCAACAAAAGCAAACATATTGTTAAGGGAAAGGTAGTTGTTGCCAAAAATCCCTGTCTGCACCCGGGAGATGTACGAGTTTTAAGAGCAGTGGATGTACCTTCTCTGCATCATATGGTGGACTGTGTTGTTTTTCCACAGAAGGGGAGAAGACCACATCCTAATGAATGTTCTGGAAGTGACTTGGATGGAGATATCTACTTTGTCAGTTGGGACCCTGATCTTATTCCTCCTCGTCAGGAAAATCCCATGGATCATGCAGCATCACCAGTTGTGAATGTGGATCATGATGTTACATTACAGGAAGTTCAGGAGTATTTTGCTCACTACATAGTTAAAGACAGATTGGGCATTGTTGCAAGTGCACACATGGTGTTTGCTGATAAGGATCCTCAAAAGGCAATGAGCCCTGCATGTATTGAGCTTGCAAAGCTACACTCAGTTGCTGTTGATTTTGCAAAATCTGGTGTGCCAGCAGAAATTCCACAACATCTACGCGTGGAAGAGTATCCAGATTTCATGGAAAAGGCAGACAGACCAAGTTACCAATCAAATAGCATAATAGGAAAGCTGTATCGTGAGGTGAAGAATGTTGCACAGCACAAGAGTCTCACCAAACCATTCACAAGAAGAGTGGCAAGGCAATCATACGACCGTGACATGGAGATTGATGGCTTTGAGAAGTACACAGCTAGTGCCAGTGAATACAAGAATATGTATGACTTCAAGTTGGGGAACCTAATGGATTACTATGGCATAGAAACAGAAGCAGAAATAATCAGTGGCAATATATTGAAAATGCCAAAATCATTCAGTGAAAGAAAGGACTTGGAAGGAATTAATCATGCTGTGATGTCTCTAAGAAAGGAAGCTAGAAGCTGGTTCAATGTGATGATGAAAAACAAGTCAAATTCTCAAGCTGATGATGATGCCTATGCAATAGCATCAGCTTGGTACCATGTTACATATCATCCTAGGTATTGGGGATCCTACAATCAAGGGCTAAACAGGGATCATTTCCTCAGTTTCCCATGGTGTGTGCATGACACTCTTATGCAGATAAAGAAGGACAAAATCAGACAGAGAACTTTTACCATGAATCACTGGAAATTACTGAAACTGATTCTACTATTACTGTTTTTCTTCCTTTTGTGGATAATAGTGCCTTATCTAAGGACTTGA 3525 0.3929 MSWVSQTTLRVESCSCCTLVVWLTWLTFLQDILQVNQSIETMCKTIRMHGFPATVSAEEVRKFLEQNTGPQTVHAVEVEQLKEEDPTTHVNVKFTDKKSVETILLLVTQNLSYGVHVLNATEIERDLLPKQRNFSHSLDDIAVHFGCQTSKNKLSVLWEHPSASVKFGSRLRKMYIFFHYLSVDYKLQISSESVSRIELHHSDDLTKKLLLFQLRNAPLIYEKDVSKSKYFKEACDNHWFRGVDFTPSCSIGQSSTLCFELPKSVEVPNFNQHYRNYNEVDDSVFTLERRHLGFSSNFNFVPIVIPPEGFNLPYKILFKINSLIQHGCLPVLAIDVNFFQLVDPGKVKLEYIESALHKLDQIKVCCYEPAQWLEKQYKKYSENSALPVSSTISLDDGLVYVHRVRVTPSKIYFCGPEVNLSNRVLRNYPEDTDNFLRVSFLDEDMDKLHSSDLVADMDRETKLHERVLATLKNGIEIGDKKFEFLAFSPSQLRDNSVWMVASRTGLTASDIRKWMGEFHEIRNVAKYAARLGQSFSSSRETVSVGRHEIKIIPDIEFRRGETRYCFSDGIGKISYELAQEVAEKCGCGDNTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMCKYKSENTKLDVLAWSKYKPCYLNRQIIALLSTLGVQDRVFRKKQREVLNQLKMLSRRPLMVLDYMSTGEIAKVLKEMLICGFHPIKEPFLSMMLQTLYASKLQELQLKTRILVKKGRALLGCLDETRTLKYGEVFVQIAHQRNKQNLAMSSLSSNRNASNKSKHIVKGKVVVAKNPCLHPGDVRVLRAVDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVSWDPDLIPPRQENPMDHAASPVVNVDHDVTLQEVQEYFAHYIVKDRLGIVASAHMVFADKDPQKAMSPACIELAKLHSVAVDFAKSGVPAEIPQHLRVEEYPDFMEKADRPSYQSNSIIGKLYREVKNVAQHKSLTKPFTRRVARQSYDRDMEIDGFEKYTASASEYKNMYDFKLGNLMDYYGIETEAEIISGNILKMPKSFSERKDLEGINHAVMSLRKEARSWFNVMMKNKSNSQADDDAYAIASAWYHVTYHPRYWGSYNQGLNRDHFLSFPWCVHDTLMQIKKDKIRQRTFTMNHWKLLKLILLLLFFFLLWIIVPYLRT* 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1400 1174 PANTHER RNA-DEPENDENT RNA POLYMERASE 43 1164 - -
Vra11g1400 1174 PANTHER RNA-DEPENDENT RNA POLYMERASE 43 1164 IPR007855 GO:0003968
Vra11g1400 1174 Pfam RNA dependent RNA polymerase 406 976 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1400 Vra-Chr11 16980219 16986126 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1400 11 16980219 16986126 Vra11g1400 11 16980219 16986126 ECH