Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1391 ATGGAAGCTACACACATTCGAGAAAAGGGTGTTGTTGAGGGAAGTGAAAACATTGCTGCTGGGAAAGAAAATGAACAAGTTCTTCTCAAGAACATTATTGCAACTCATCCTTTGTATGAACTTTTGATTCAATCTCACATCAACTGCTTCAAGGTGGGATTAAGCGAAGCTGAAGTGTTTGATGATGATGCACTGAAGAAGCTGATGAATTCAAAGTCCAAAGCAACATCTGGTGCAAACACTTCAGAGTTAGATCACTTCATGGAAGCTTATTGCATGGCACTGAGCAAGCTGAAAGAGGCAATAGAAGAACCAACAAAAGAAACGAATGCTTTCATCAGAGCCACGTATCATGAACTAAAGCAACTGGAAGAAGTGAAGCACCCATAA 390 0.4026 MEATHIREKGVVEGSENIAAGKENEQVLLKNIIATHPLYELLIQSHINCFKVGLSEAEVFDDDALKKLMNSKSKATSGANTSELDHFMEAYCMALSKLKEAIEEPTKETNAFIRATYHELKQLEEVKHP* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1391 129 Pfam KNOX1 domain 29 53 IPR005540 GO:0003677|GO:0005634
Vra11g1391 129 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 23 123 - -
Vra11g1391 129 SMART KNOX2_2 73 125 IPR005541 GO:0003677|GO:0005634
Vra11g1391 129 Pfam KNOX2 domain 82 123 IPR005541 GO:0003677|GO:0005634
Vra11g1391 129 PANTHER FUSED COMPOUND LEAF 1 23 123 - -
Vra11g1391 129 SMART KNOX1_2 27 77 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1391 Vra-Chr11 16884140 16885030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1391 29 123 Homeobox Transcription Factor Family AT4G08150 32.673 5.47e-10 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1391 11 16884140 16885030 Vra11g1391 11 16884140 16885030 ECH