Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1390 ATGATAACCAGATCCAGGAAATTGAAGCGCGAGCTCGAGCTGGAGCCACCTCCGGTCATTGTCACTAAGAAGCATAGGCAGAAGTTGCCTCGCCGGCGAAGGCAAAACTTCTCTCCCGTTCTTCTAGTCAGCGACTCTTGCCAGAATCCTCGTTTCTCTGTGGATTCCAGTTCCGGCTCTGACTTCGCTGTCGGCGTTGCTTCTTGTAACTCCAGCAGAGCTTCCATCGCCGGCAAGGAAAACATGAACTCGAGAAATGAATCATCGATCGATTCAACGAGAAATCAGAGGTTTGAGAAACGAAACGAGAACGAAGTAGAGGTTTCGGAGTCTTCGTGTGCGGACTCCAATTCATTCGCTCGAGATCGAAGCAGGAGGTCAATTCTGAAATTCAAAAGTGGAAGAGAATATAATAGTCTGAGAGGAGAAGATGACGTTTCGGATGTTTGCATAAAGTCGGATATTACTGGTATTCTGAAGTTGAATAGCGGAAGCAAGAGTAAGAACGTAAAAAAAAATGACGACGTTTCGTGCGGGAAATCAGAGATAACTTGCGAGGACCAGTTCAATTCGAAGTCATCCAGTGATGGGAACGGAAACATGAAAATTTCTTCGGAGTCAAACGGAAACGACGCCGTGTCGTTTAGTTCATTTGTTCGCGCGTCGTTAGAGGAAGAAAAGGATAGCAGCAAGGAAAACAGAGCGTTGGAATGTGAATACTCTGTAGGCTCTAAACATCTACACGCGGAAGAGAATTGCGCGGATTTAGTAGCGCAATCGATGACGAGGCAGGAATCGGATAATTACGACGTCGTTGCGGACCTCACTTGCTCTGAGGAACTGCGTTTCTCATACTGTGATGACGATGACGAATCGGAATACTGTTCCAGTCAGGGAACTGTGTTCTCTGAATTTCATTCTGAGATTTTCGGTGAATGCTCGCAGCAGGGGCTTTCAGATTACACTCCGTCGCTGTTCGTGGATTCTGGAAGCCAGTTTTCCGAGGGATCCGTCGGAGAAACATCTTCACCAACGTATTTGTTGTTCCTTCAGTATCGCAAGGAGTTCACGACTCTAACTTCTGCTTCTGCAGTGGTGAACTCTTCTTCAAGTGACGAAGATGAAGCCGATTTTGTGAGATTCGAAGATTCTGATGACGAAGACAGCTACCAGATGCTGAGGAAGAGGGAGAGGAAGCAAGGTTTTGTGTCGAATTATGGTGAAAGGTATTTCTCTACCACTGAATTCGGAGAGACCGTGCTTGAACAACGTGCGCAAATGGTTCACTGGATCGTTGAGTTGTTGGACTTTGAATCGAGTGTAGAGTTTGTTTACGAGGCCTTATTTCTTGAAATTTGGCAGCAATCTTGTCGAAAACAGCTTCGGCAAGAGACGATTTTTCTTGGCGTCAACCTACTTGACCGTTTCCTAAACAAAGGATACTTCAAAGCCCAAAAACGCCTTCAAATTGTTGGAATAGCATGCCTCACGTTAGCAACCAGAATCGAAGAAAATCAGCAATACAACAGGGTGGGGCAAAGCAATTTCAACGTAGGAAGCAATAGGTACAGCAGAGGCGAGGTGGTAGCCATGGAATGGATGGTGCAGGAGGTGCTCAAGTTTCAGTGCTTTCGGCCCACCATCTACAATTTCTTGTGCTTTTACCTAAAAGCAGCCAATGCTGATGCAGTCGTTGAGAAGAGGGTCAAGTATCTGGCAGTGCTGACACTGTCATCTCATGAGCAACTGTGTTACTGGCCTTCAACAGTTGCTGCAGCACTTGTAGTCCTGGCTGGTCTTGAATTCAATCAAAGTTCACCGCTCAAAGTAATCGGGATCCACGTTAGATCAAAAGATGAGAATTTGTACGAGTGCATAGAGAGCCTGGAAACGCTGTTGCGCTACATAGGATAA 1914 0.4619 MITRSRKLKRELELEPPPVIVTKKHRQKLPRRRRQNFSPVLLVSDSCQNPRFSVDSSSGSDFAVGVASCNSSRASIAGKENMNSRNESSIDSTRNQRFEKRNENEVEVSESSCADSNSFARDRSRRSILKFKSGREYNSLRGEDDVSDVCIKSDITGILKLNSGSKSKNVKKNDDVSCGKSEITCEDQFNSKSSSDGNGNMKISSESNGNDAVSFSSFVRASLEEEKDSSKENRALECEYSVGSKHLHAEENCADLVAQSMTRQESDNYDVVADLTCSEELRFSYCDDDDESEYCSSQGTVFSEFHSEIFGECSQQGLSDYTPSLFVDSGSQFSEGSVGETSSPTYLLFLQYRKEFTTLTSASAVVNSSSSDEDEADFVRFEDSDDEDSYQMLRKRERKQGFVSNYGERYFSTTEFGETVLEQRAQMVHWIVELLDFESSVEFVYEALFLEIWQQSCRKQLRQETIFLGVNLLDRFLNKGYFKAQKRLQIVGIACLTLATRIEENQQYNRVGQSNFNVGSNRYSRGEVVAMEWMVQEVLKFQCFRPTIYNFLCFYLKAANADAVVEKRVKYLAVLTLSSHEQLCYWPSTVAAALVVLAGLEFNQSSPLKVIGIHVRSKDENLYECIESLETLLRYIG* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1390 637 MobiDBLite consensus disorder prediction 189 210 - -
Vra11g1390 637 Gene3D - 540 636 - -
Vra11g1390 637 Pfam Cyclin, N-terminal domain 452 542 IPR006671 -
Vra11g1390 637 SUPERFAMILY Cyclin-like 387 542 IPR036915 -
Vra11g1390 637 PANTHER CYCLIN-SDS 6 627 - -
Vra11g1390 637 CDD CYCLIN 545 635 IPR013763 -
Vra11g1390 637 MobiDBLite consensus disorder prediction 78 104 - -
Vra11g1390 637 CDD CYCLIN 448 535 IPR013763 -
Vra11g1390 637 PANTHER CYCLINS 6 627 IPR039361 -
Vra11g1390 637 SUPERFAMILY Cyclin-like 545 633 IPR036915 -
Vra11g1390 637 SMART cyclin_7 450 537 IPR013763 -
Vra11g1390 637 SMART cyclin_7 550 631 IPR013763 -
Vra11g1390 637 Pfam Cyclin, C-terminal domain 546 633 IPR004367 -
Vra11g1390 637 Gene3D - 415 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1390 Vra-Chr11 16871294 16876700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1390 366 605 Core Cell Cycle Gene Families AT5G25380 30.364 1.46e-19 90.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1390 11 16871294 16876700 Vra11g1390 11 16871294 16876700 ECH