Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1389 ATGTCGGTCACTTTGGACTATGCTGGTCAAAGAGCTGAAGCTATTCCCCAATCCACACCAATACCGAATTGGACTATTCATGTGTCAGACATAAGAACAGTTAAGGTTAGCAACATATCACTGGTTACTTCCAAGGTGGAGATTCGAGAATTCTTTTCATTCTCAGGTGATATTCAGTATATTGAGATGCAGAGGGAAAGTGACCGCACTCAAGTTGCTTATGTTACATTTAAGGATACACAGGGAGCAGACACAGCAGTTCTCTTAACAGGTTCAAAGATAGGTGATCTATATGTCACAATCGCACCTGTGGAGAAGTATCAGCTTCCCCCTGATGCTCTTCCAGTAAGTCCGAGAAACCAAAGTGCTGATGCAGTAAAGAAGGCTGAAGATGTAATGAGCACCATGCTTGCTAAGGGTTTCATTTTAGGAAAGGATGCCATCAACAAGGCAAAAGCCTTTGATGAGCGTCACCAGTTGACCTCAAATGCATCTTCCAGAGTTGCTTCCATTGATCGTAGAATGGGTTTCAGTGACAAAATAAGTATTGGAACAGCTATTGTGAATGGAAAAGTGAGAGAGATGGATGAAAAATATCAGCTTTCTGAAATGACAAAGTCTGCTCTTGCTGCTGCAGAGCAAAAGGCAAGCAGTGCTGGATCTGCTATCATGAGCAATTCTTATGTATCAACTGGAGCTTCATGGGTGTCTAGTGCCTTTAATGCTATAGCAAAAGCAGCAGGGGATGTCAGCAGCATGACAAGGGAGAAGGTTGAACAGGCAGAGGTGGAAAGGAATGAGATCATTTATAGTGAAAGGAAAGGGACTGTTGATGAATTTGGAATGAAAAACTTGCAGGATGCTTCAGACATGGGTCCTGCAATAGTTCCTGTTAATTCACATGATGACCATAAGCTAGAAATTATATAA 930 0.4204 MSVTLDYAGQRAEAIPQSTPIPNWTIHVSDIRTVKVSNISLVTSKVEIREFFSFSGDIQYIEMQRESDRTQVAYVTFKDTQGADTAVLLTGSKIGDLYVTIAPVEKYQLPPDALPVSPRNQSADAVKKAEDVMSTMLAKGFILGKDAINKAKAFDERHQLTSNASSRVASIDRRMGFSDKISIGTAIVNGKVREMDEKYQLSEMTKSALAAAEQKASSAGSAIMSNSYVSTGASWVSSAFNAIAKAAGDVSSMTREKVEQAEVERNEIIYSERKGTVDEFGMKNLQDASDMGPAIVPVNSHDDHKLEII* 310
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1389 309 Coils Coil 308 309 - -
Vra11g1389 309 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 16 307 - -
Vra11g1389 309 SUPERFAMILY RNA-binding domain, RBD 18 107 IPR035979 GO:0003676
Vra11g1389 309 Gene3D - 28 102 IPR012677 -
Vra11g1389 309 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 16 307 - -
Vra11g1389 309 SMART rrm1_1 33 102 IPR000504 GO:0003723
Vra11g1389 309 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 96 IPR000504 GO:0003723
Vra11g1389 309 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra11g1389 Vra-Chr11 16867019 16870541 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1389 11 16867019 16870541 Vra11g1389 11 16867019 16870541 ECH