Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1374 ATGGCTGCCACATTCTTCTCTCAATCGCTTCTTCAATCCAGCAATCTTTCTCCTTCTTGTCTCTCTCCTCGCATCCCTCATTCTCTGGTTAGCCGTGCCAAACCCTCTTGCCTCGGGGTGGTTTCTGTGAGCAAAAGGGTAAGTGGGGTGGTGCCTAATGCTGCTCTGAAAGCCTTGGAAACTAATTCGGATTTCCCCATTTCGGCTAAGAAGTCCATCAACAACCCCATTGTGGTTATTGATAACTATGACAGCTTTACCTATAATCTTTGCCAGTATATGGGAGAGTTAGGATTTCACTTTGAGGTCTACCGCAATGATGAGTTGACAGTGGAGGAGTTGAAAAGGAAAAATCCTAGAGGAGTGCTAATATCACCTGGGCCAGGGGAACCTCAAGATTCTGGCATATCTTTGCAAACAGTTTTGGAACTTGGACCAACTGTACCATTGTTTGGTGTGTGCATGGGTTTGCAGTGCATCGGTGAGGCTTATGGAGGAAAGATTGTTCGTTCTCCTTATGGTGTCATGCATGGAAAAAGTACCTTGGTTTATTATGATGAGCAAGGAGAAGATGGAGTACTTGCTGGACTGTCAAATCCTTTCTTGGCTGGTAGATATCACAGCCTTGTGATTGAGAAAGAGAGTTTTCCTGATGAACTTGAGGCAACAGCCTGGACAGAAGATGGTCTTATAATGGCTGCTCGCCATAAGAAATATAAGCATTTGCAGGGAGTTCAGTTTCATCCGGAGAGCATCATAACTCCAGAAGGGAAGAAAATTGTCCAAAATTTTGTGAAGCTTATTGAGAGAATGGAGGGTGGTGGTTCTTAA 831 0.444 MAATFFSQSLLQSSNLSPSCLSPRIPHSLVSRAKPSCLGVVSVSKRVSGVVPNAALKALETNSDFPISAKKSINNPIVVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGEPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAYGGKIVRSPYGVMHGKSTLVYYDEQGEDGVLAGLSNPFLAGRYHSLVIEKESFPDELEATAWTEDGLIMAARHKKYKHLQGVQFHPESIITPEGKKIVQNFVKLIERMEGGGS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1374 276 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 76 274 - -
Vra11g1374 276 CDD GATase1_Anthranilate_Synthase 77 265 IPR006221 -
Vra11g1374 276 Gene3D - 75 267 IPR029062 -
Vra11g1374 276 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 18 273 - -
Vra11g1374 276 SUPERFAMILY Class I glutamine amidotransferase-like 77 271 IPR029062 -
Vra11g1374 276 PANTHER ANTHRANILATE SYNTHASE BETA SUBUNIT 1, CHLOROPLASTIC 18 273 - -
Vra11g1374 276 PRINTS Anthranilate synthase component II signature 77 91 - -
Vra11g1374 276 PRINTS Anthranilate synthase component II signature 122 131 - -
Vra11g1374 276 PRINTS Anthranilate synthase component II signature 149 160 - -
Vra11g1374 276 PRINTS Anthranilate synthase component II signature 175 183 - -
Vra11g1374 276 PRINTS Anthranilate synthase component II signature 198 210 - -
Vra11g1374 276 PRINTS Anthranilate synthase component II signature 244 257 - -
Vra11g1374 276 PRINTS Glutamine amidotransferase superfamily signature 122 131 - -
Vra11g1374 276 PRINTS Glutamine amidotransferase superfamily signature 149 160 - -
Vra11g1374 276 PRINTS Glutamine amidotransferase superfamily signature 244 257 - -
Vra11g1374 276 Pfam Glutamine amidotransferase class-I 78 265 IPR017926 -
Vra11g1374 276 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 119 133 - -
Vra11g1374 276 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 149 165 - -
Vra11g1374 276 TIGRFAM trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 77 266 IPR006221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1374 Vra-Chr11 16707688 16711291 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1374 11 16707688 16711291 Vra11g1374 11 16707688 16711291 ECH