Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02654 ATGGATGTTGCCACCACCAACTCCGGCGAATCCAATTCGAGTCCGGAGGTCCAGCTCGAAGAGAATCGAACAGTGTCGGGTATCAATTCGATGGCGAGGTACAAGCTCTTGTCTCCGGCGAAGCTTCCGATCTCGAGGTCGCCGTGTGTCACTGTACCGCCGGGGTTTAGTCCGACGTCGTTTTTGGAGTCGCCGGTTCTTCTTTCTAACATGAAGGTGGAACCGTCGCCGACTACAGGGTCCTTTCTTCAAGCTTTACACTGTTCTATGGCTTCTCCTGGTTCTGCTACATTTTCTCTAACGCCTGCATGCTTCAATACCGGCGCTGCTAATGGCAGAAAATCAAGTTTCTTTGAGTTTAAACCAAATGATAGAAATATGGTTCCTGCAGACTTCAACAACGATGTAAGTGTAAGTGAACAATCTACTCAAGTTCAATCATTTCGTTCCTCGCCATTAAATGAAAACGAAATAGAAGATCAATCTAATGAGTTAAGCTTACCATCACCTGTTCGGATGATTAGTCCTGGCACTTGTGCTCCCGTTGATGGCAATTCGAGTGAACTTAACCTGAAAGGTAACGCAGCTAATGTCCCTCAATCCTCAAACGATGGATATAATTGGCGAAAGTATGGACAAAAACATGTAAAAGGGAGTGAATTCCCGCGCAGCTACTACAAATGTACGCACCCTAATTGTGAGGTGAAAAAACTTTTCGAACGCTCTCATGACGGTCAAATCACCGAGATTATTTATAAGGGGACACATGATCATCCTAAACCTCAACCAAACAACCGATACTCTGCTGGTTCTGTTATGTCTACGCAAGGAGAGAGGTCTGATATTAGGGTAGACAAAACATCCAATAGTCCAGAGCAATCGCCTGTGGCAACAAATGATCTTAGTCTAGACGGTGCTGGATTTGCGTCGACTAGGACAAATGACGAGGTTGATGATGATGATCCCTTCTCCAAGCGAAGAAAAATGGAACTTGGAAATGCTGAAATCATTCCTATTGTTAAGCCTATCCGAGAGCCGCGAGTTGTTGTACAGACTATGAGCGAAGTTGATATATTGGATGATGGATACCGCTGGCGTAAATATGGACAGAAGGTGGTGAGGGGTAATCCTAACCCAAGGAGTTATTACAAATGTACAAATGCGGGTTGCCCTGTTAGAAAACACGTGGAGCGAGCATCGCATGATCCAAAAGCTGTAATAACAACATACGAAGGTAAACACAATCATGACGTACCTGCGGCAAAGAATAGTAGCCATGACATGTCAAGACACGCAGCTTCAATTGAAATGACAAGGATAAAGTTGGAAGAAAGTGATACTATTAGTCTTAACCTTGGGATGGGAATCAACTCAGCAACTGAAAACAGATCAAACGGGCGAAGGCATATGCTGCTTTCCGAATTCGGGAATAGCAGTCAAACTCATACAAGCAATTCCAATTTCAAGTTTGTACATACTACATCGGTACCGGTATACTATGGTGTTCTAAATAACAGTTCAAATCCGCTTGGTTCTAGAGAAAATAGAAATGATGGTTTACCTTTGAACCGTTCCGCGTATCCTTGCACGCAAAACATGGGAAGAATACTAATGGGGCCATGA 1623 0.4399 MDVATTNSGESNSSPEVQLEENRTVSGINSMARYKLLSPAKLPISRSPCVTVPPGFSPTSFLESPVLLSNMKVEPSPTTGSFLQALHCSMASPGSATFSLTPACFNTGAANGRKSSFFEFKPNDRNMVPADFNNDVSVSEQSTQVQSFRSSPLNENEIEDQSNELSLPSPVRMISPGTCAPVDGNSSELNLKGNAANVPQSSNDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPNNRYSAGSVMSTQGERSDIRVDKTSNSPEQSPVATNDLSLDGAGFASTRTNDEVDDDDPFSKRRKMELGNAEIIPIVKPIREPRVVVQTMSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAAKNSSHDMSRHAASIEMTRIKLEESDTISLNLGMGINSATENRSNGRRHMLLSEFGNSSQTHTSNSNFKFVHTTSVPVYYGVLNNSSNPLGSRENRNDGLPLNRSAYPCTQNMGRILMGP 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02654 540 Gene3D WRKY domain 192 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g02654 540 Gene3D WRKY domain 344 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g02654 540 SMART WRKY_cls 359 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02654 540 SMART WRKY_cls 202 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02654 540 MobiDBLite consensus disorder prediction 287 309 - -
Vivi7g02654 540 MobiDBLite consensus disorder prediction 252 324 - -
Vivi7g02654 540 ProSiteProfiles WRKY domain profile. 203 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02654 540 FunFam WRKY transcription factor 192 262 - -
Vivi7g02654 540 MobiDBLite consensus disorder prediction 1 21 - -
Vivi7g02654 540 MobiDBLite consensus disorder prediction 506 525 - -
Vivi7g02654 540 MobiDBLite consensus disorder prediction 261 278 - -
Vivi7g02654 540 ProSiteProfiles WRKY domain profile. 354 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02654 540 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 456 IPR044810 GO:0003700
Vivi7g02654 540 FunFam WRKY transcription factor 33 346 412 - -
Vivi7g02654 540 Pfam WRKY DNA -binding domain 203 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02654 540 Pfam WRKY DNA -binding domain 360 416 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02654 540 SUPERFAMILY WRKY DNA-binding domain 351 419 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g02654 540 SUPERFAMILY WRKY DNA-binding domain 201 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02654 Vivi-Chr7 90382017 90385714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02654 37 540 WRKY Transcription Factor Family AT4G26640 53.073 1.28e-171 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi7g02654 WRKY 1.3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02654 7 90382017 90385714 Vivi7g02654 7 90382017 90385714 ECH
Vivi3g05391 3 110479705 110485250 Vivi7g02654 7 90382017 90385714 PCT