Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00770 ATGAACACAGAAAGCCGTGACCAACTGAAAATTTCAGCCGAAACAGGTGACATAGAACTCCTCTATGCCGTAATTGAAGAAGACCCATCGATTTTGAAAATCATAGATGAAAACCAATTTGTAGTTACTCCTTTGCATATCGCTGTAACTAGGTGTCATCTCGAGTTTGCCAATGAAATTATGAATTTGAAACCTTCATTTGCTTCCAAGCTAAATTTGCAAGGATACAGTCCCATTCATCTTGCAATGGACAACATCCGTCTGGCTATGGACGGCCCCACTGAATCTAATGAAGCTAATAACCTAAGGGTGATGGTGTCAAAGTTGGTAGGCATCAATAAAGATCTTGTTAGAGTTAAAGGAAGAAAAGGCTTGACTCCACTTCATATGGCATGTCAAAACGGGGAGTTTGAATTGGTATGTACATTTTTGGTTGCTTGTCCGGATTCCATTGAAGATGTAACTGTGAGAGGTGAATCTGCATTGCATATTGCTGCTAAGATGGGAAATCATGGGGTCCTTCAATTTCTTCTTGGGTGGCTCCATGTAAATTGTCGAAGAGGTGCTAAAAAGCTGAAATGGGAAATGTTGAACTTGAGAGACTACGAAGGCAACACTGCTTTGCACATTTCAGCCCTTAGTAGAGAACCAACGCACTTGAATTGGTTGATAATTGCAACTCTTGTTGCAACTGTAACCTATGAATCGGCACTGAGTCCCCCGGGTGGAGTTTTCCAGGTTAGTGCAAGTGATGACAACAATATGAAAATCAAGTCTGGAGATATGTATTATTCTACCCGAGGAAATGCTGGGAAATCGATCTTGTCAAAAACTAGTTTCATGGGGTTTTCATTAGCGAATATGCTTTCCTTTTCTTTATCAATTATAGCAATAGTAATTATGACTCCAAGGGGAGTACTAAGGCCCCTCGTGTTAGCTCCGGTGACTTTTTTTACTCTTTGCTATCTAATTGCTATGCCAGCAATATCTCCTACTCTTGCTAATACTATTATTCTTAGCATCCCTATGTATTCAATTTTTTTATTGGCGGGCGAGGTAAGGCCAGCTGATTTTCCTTTTGACGCAGAACCAGAAAGAACGTTGCACGCTAGACTTAGACAAGCAAAAAGAGAAAGACTGGCAGCATCAGAAGGTGAACAGAGCATAAGAGATAAAGAAGAAGAAGAAGTTTCAGTTAATTCGGAAAATTCTGCTTCGGATACTGAGACAATTCCCAAAACGATGGCAGCTGACCCACCTCCACCTGTTGAAAGACTTCTTGGAGATTATGAAGGAAATAAATTACCGGCTGGTCGAATGACAATTGTGAACCAACCGGCGAATGCGGCACAATTTCAGCTGCATCCAAGCACGATAAATCAACTTGAAAGGCATTATTTTTCTGGAAGGGTGAACGAAGATGCAAATAAACATCTTCAACGGTTTCTCACTATGAGTACCACTCTGAAGATAGATGGACATACATAG 1488 0.4079 MNTESRDQLKISAETGDIELLYAVIEEDPSILKIIDENQFVVTPLHIAVTRCHLEFANEIMNLKPSFASKLNLQGYSPIHLAMDNIRLAMDGPTESNEANNLRVMVSKLVGINKDLVRVKGRKGLTPLHMACQNGEFELVCTFLVACPDSIEDVTVRGESALHIAAKMGNHGVLQFLLGWLHVNCRRGAKKLKWEMLNLRDYEGNTALHISALSREPTHLNWLIIATLVATVTYESALSPPGGVFQVSASDDNNMKIKSGDMYYSTRGNAGKSILSKTSFMGFSLANMLSFSLSIIAIVIMTPRGVLRPLVLAPVTFFTLCYLIAMPAISPTLANTIILSIPMYSIFLLAGEVRPADFPFDAEPERTLHARLRQAKRERLAASEGEQSIRDKEEEEVSVNSENSASDTETIPKTMAADPPPPVERLLGDYEGNKLPAGRMTIVNQPANAAQFQLHPSTINQLERHYFSGRVNEDANKHLQRFLTMSTTLKIDGHT 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00770 495 MobiDBLite consensus disorder prediction 379 399 - -
Vivi7g00770 495 ProSiteProfiles Ankyrin repeat profile. 157 178 IPR002110 GO:0005515
Vivi7g00770 495 SMART ANK_2a 203 234 IPR002110 GO:0005515
Vivi7g00770 495 SMART ANK_2a 40 69 IPR002110 GO:0005515
Vivi7g00770 495 SMART ANK_2a 123 153 IPR002110 GO:0005515
Vivi7g00770 495 SMART ANK_2a 157 185 IPR002110 GO:0005515
Vivi7g00770 495 SMART ANK_2a 4 33 IPR002110 GO:0005515
Vivi7g00770 495 SMART ANK_2a 74 114 IPR002110 GO:0005515
Vivi7g00770 495 MobiDBLite consensus disorder prediction 379 423 - -
Vivi7g00770 495 Pfam Domain of unknown function 222 302 IPR026961 -
Vivi7g00770 495 Gene3D - 3 236 IPR036770 -
Vivi7g00770 495 ProSiteProfiles Ankyrin repeat region circular profile. 157 178 - -
Vivi7g00770 495 Pfam Ankyrin repeats (3 copies) 105 178 IPR002110 GO:0005515
Vivi7g00770 495 SUPERFAMILY Ankyrin repeat 16 224 IPR036770 -
Vivi7g00770 495 ProSiteProfiles Ankyrin repeat profile. 123 145 IPR002110 GO:0005515
Vivi7g00770 495 ProSiteProfiles Ankyrin repeat region circular profile. 123 145 - -
Vivi7g00770 495 PANTHER HOMEOBOX PROTEIN WARIAI 222 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00770 Vivi-Chr7 44533904 44540665 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00770 8 212 Miscellaneous Gene Families AT4G10720 45.366 3.43e-50 175