Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00768 ATGAGCACATCCAATCTCGATAATCTGAAAGCTGCATCTAACTTAGGTGATATAGATCTTCTTTACACAGTAATTCAGGATGATCCATCCATTTTGGATAATATTGATTCAATACAATTTGTCGAAACTCCCTTGCATATCGCGGCATCTAGGGGTCATATCCAGTTTTCCATTGAAGTAATGAACTTGAAACCTTCGTTTGCTTGGAAGCTAAATCCACAAGGATTCAGCCCTATTCACCTTGCTATGCAAAACGGCGAAAAAAGGATGGTGTCTCGGCTTGTTGACATGAATAAAGATCTTGTTAGAGTTAAAGGAAGAGAAGGGTTTACTCCTCTTCATTTTGCAAGTCAAATAGGAGAGGTTGCAATTTTAACTGAATTCCTCTCTGCTTGTCCGGAATCCATTGAAGATGTGACTGTGAGAGGTGAGACTGCACTTCATGTTGCGGTGAAAAGCAACAACTATGAGGCTTTTCATCTACTTGTTACGTTTCTTAGGACGAGTATGGAGAGAGGGGCTAGGAAGTTAGAATATAAAATACTGAATCGGAAGGATGAGGTTGACAATACTATTTTGCACATTTTAGTGCAGAGGAATTTCGAGCCCCAGGTAAAAGATGCCCTTGGATTGTTGTTAAAGACTAAGATAAATATTCAGGCAAAGAACATGGACACCAAAACTGCATTCGACATGTCAGCCAATGTAGACATTAGGAGTATTTTGTTGTGTGCTGGAGCGAAACCCGGCTTACCAGTTTCCAACATTCCCACACATGGTCATAAACCAAGATCAAAGACCGCGATTATTGATAACGGGTTAATTTGGATACGTAGCATTAGAAGAGATATATCAGAGGATCAACGTAACACTTGGTTAATAGTTGTAACTCTTGTTGCAACTGCAACCTATCAATCCGCACTGAGTCCTCCTGGTGGAGTTTATCAGGCTAATGCTACGGACAATACTGTCAACACTTTCTCCAATTCTACTAATGCTGGAAAATCAGTATTGTCAAGAAATGGTTTCATTGTGTTTTCATTAGCGAATATGGTATCCTTTTTTGCGTCAATTATAGCAATATTCATTCTGACACCAAGTGGGCTAGTCGGCGCTCTGGTGTTTGTTCCAGTGGGCTGGTTTGTTGTTTGTTATCTGTTTTCTATGGGGAAGATATCACCTACATGTACCAACTCTATTATTGTTAACATTGCTATGTTTTCGATTGGATTTCTTGCGTTTTGTTCTGCTATTATAGTGTACTTTCGACTTCAACAGGAACGCAATGCAAAGAAGAAGAGTAGATCATAG 1311 0.3959 MSTSNLDNLKAASNLGDIDLLYTVIQDDPSILDNIDSIQFVETPLHIAASRGHIQFSIEVMNLKPSFAWKLNPQGFSPIHLAMQNGEKRMVSRLVDMNKDLVRVKGREGFTPLHFASQIGEVAILTEFLSACPESIEDVTVRGETALHVAVKSNNYEAFHLLVTFLRTSMERGARKLEYKILNRKDEVDNTILHILVQRNFEPQVKDALGLLLKTKINIQAKNMDTKTAFDMSANVDIRSILLCAGAKPGLPVSNIPTHGHKPRSKTAIIDNGLIWIRSIRRDISEDQRNTWLIVVTLVATATYQSALSPPGGVYQANATDNTVNTFSNSTNAGKSVLSRNGFIVFSLANMVSFFASIIAIFILTPSGLVGALVFVPVGWFVVCYLFSMGKISPTCTNSIIVNIAMFSIGFLAFCSAIIVYFRLQQERNAKKKSRS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00768 436 Pfam Ankyrin repeats (3 copies) 105 163 IPR002110 GO:0005515
Vivi7g00768 436 Pfam Ankyrin repeats (3 copies) 11 100 IPR002110 GO:0005515
Vivi7g00768 436 SMART ANK_2a 108 138 IPR002110 GO:0005515
Vivi7g00768 436 SMART ANK_2a 74 103 IPR002110 GO:0005515
Vivi7g00768 436 SMART ANK_2a 142 172 IPR002110 GO:0005515
Vivi7g00768 436 SMART ANK_2a 40 69 IPR002110 GO:0005515
Vivi7g00768 436 SMART ANK_2a 188 221 IPR002110 GO:0005515
Vivi7g00768 436 ProSiteProfiles Ankyrin repeat profile. 142 163 IPR002110 GO:0005515
Vivi7g00768 436 SUPERFAMILY Ankyrin repeat 14 233 IPR036770 -
Vivi7g00768 436 Gene3D - 7 263 IPR036770 -
Vivi7g00768 436 ProSiteProfiles Ankyrin repeat profile. 74 101 IPR002110 GO:0005515
Vivi7g00768 436 Pfam Domain of unknown function 286 368 IPR026961 -
Vivi7g00768 436 PANTHER HOMEOBOX PROTEIN WARIAI 17 399 - -
Vivi7g00768 436 ProSiteProfiles Ankyrin repeat region circular profile. 142 163 - -
Vivi7g00768 436 ProSiteProfiles Ankyrin repeat region circular profile. 74 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00768 Vivi-Chr7 44429757 44432597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00768 9 386 Miscellaneous Gene Families AT4G10720 36.132 7.37e-77 243