Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00762 AATCCTACACGCCAATTTGTACAAACTCCTTTGCATATCGCTGCCGTGATGGGTCAACTCGAGTATGCCATTGAAATTATGAATTTGAAACCTTCATTTGCTACGAAGCTAAATAATCAAGGATTTAGTCCCATCCATTATGCTATGCTCCGCCAATATAGGGAAAGCCCCACTCCTCTTCCTATGGATAACCGCCAAATACTGATGGTGTCTTACTTGGTTGGCATCAATAAAGATCTTGTTAGAGTTAAAGGAAGAGAAGGCTTGACTCCACTTCATTTAGCAGGTAAAATGGGGGAGGTTGAACTTGTAGCTAAATTCCTCACTGTTTGTCCGGATTCCATTAAAGATGTAACTGTGAAAGGTGAATCTGCATTGCATATTGCTGCCAGGATGAAACAATATAAGGCCCTTGAATTTCTTCTTACGTGGCTCCAAGAAAATTGTGGAAGAGGTGCTAAAAAGCTGAAATGGGAAATACTGAACCTGAAAGACTACAACGGCAACACTGCTTTGCACATTTCAGCCCTTAGTAGTGAACCAAAGTCTCTTGAATATCTGGCAAACACTTGGATGAGCTTGGATGGAATGAACTCCGAGAAGAAAAAAGCAATTGATTTAGCAAGTACTCCAGAGATGAAGAAAATATTAACAAGTGCTAAAAAAAGACGTCTCTCAATAATGACTAAGGTCGGCATTCTTGATGCCATAACTTGGATAAGTAGAATTAGAAGTGATATAACAGAGGAGCAGCGTAACACTTGGTTGATAATTGCAACTCTTGTTGCAACTATAACCTATGAATCAGCATTGAGTCCTCCAGGTGGAGTTTTCCAGGTAAGTGCAACTGATGACCACAATATGAAAATCAAGTCTGCAGATATGTATTATTCTACCCGAGGAAATGTTGGGAAATCGATCTTGTCAAAAACTAGTTTCATGGGTTTTTCATTAGCGAATATGCTTTCCTTTTCTTTATCAATTATAGCAATAGTAATTATGACCCCAGGGGGAGTACTAAGGCCCCTTGTGTTAGCTCCGGTCACTTTTTTTACTCTTTGCTATCTAATTGCTATGCCAGCAATATCTCCTACTCATACCAACACTATTATTCTCAGCATCCCTATGTATTCAATTTTTTTATTGGCGGGTTTTATGTTTTATTTCTTTGGGGACCGTATTATTATAAAAAAGAGAATAATCTCTTGTTACAAATGCATGAGAGCAACTCAAAGTCAAACCTGCATGATAGCAACTCAAAGTCAAACCTCTGTAACCCGTGTTTAG 1287 0.3877 NPTRQFVQTPLHIAAVMGQLEYAIEIMNLKPSFATKLNNQGFSPIHYAMLRQYRESPTPLPMDNRQILMVSYLVGINKDLVRVKGREGLTPLHLAGKMGEVELVAKFLTVCPDSIKDVTVKGESALHIAARMKQYKALEFLLTWLQENCGRGAKKLKWEILNLKDYNGNTALHISALSSEPKSLEYLANTWMSLDGMNSEKKKAIDLASTPEMKKILTSAKKRRLSIMTKVGILDAITWISRIRSDITEEQRNTWLIIATLVATITYESALSPPGGVFQVSATDDHNMKIKSADMYYSTRGNVGKSILSKTSFMGFSLANMLSFSLSIIAIVIMTPGGVLRPLVLAPVTFFTLCYLIAMPAISPTHTNTIILSIPMYSIFLLAGFMFYFFGDRIIIKKRIISCYKCMRATQSQTCMIATQSQTSVTRV 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00762 428 SUPERFAMILY Ankyrin repeat 8 208 IPR036770 -
Vivi7g00762 428 ProSiteProfiles Ankyrin repeat profile. 87 108 IPR002110 GO:0005515
Vivi7g00762 428 PANTHER HOMEOBOX PROTEIN WARIAI 5 373 - -
Vivi7g00762 428 Pfam Ankyrin repeats (3 copies) 69 142 IPR002110 GO:0005515
Vivi7g00762 428 ProSiteProfiles Ankyrin repeat region circular profile. 87 108 - -
Vivi7g00762 428 Pfam Domain of unknown function 248 335 IPR026961 -
Vivi7g00762 428 Gene3D - 1 219 IPR036770 -
Vivi7g00762 428 SMART ANK_2a 87 117 IPR002110 GO:0005515
Vivi7g00762 428 SMART ANK_2a 40 82 IPR002110 GO:0005515
Vivi7g00762 428 SMART ANK_2a 121 151 IPR002110 GO:0005515
Vivi7g00762 428 SMART ANK_2a 167 196 IPR002110 GO:0005515
Vivi7g00762 428 SMART ANK_2a 6 35 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00762 Vivi-Chr7 44168431 44170314 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00762 6 394 Miscellaneous Gene Families AT1G14500 30.496 1.94e-56 190