Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00224 ATGGAAAATCCGAAACCAGATGGATCTGTTTCGAGGCGTGTTTCTCTCAGAAAGAGAGTTAATATGCGAAGTTACAATGAGGGTATGCTGGATGATGAGCTTTTTGACAAGTTGGATACTAGTTTAAAGAAGAAGAAGGGACCCAAATATGATGTCAATAAAGAGACTGACACCGAGGCTATGATTGCCTTCTCCCTTGGTTTCCCGATTGATGCTTTGCTTGACCACGAGATTCGATCTGGGGTTGTTAAAGAATTGGGTGGGAAAGAGCAGAATGATTATATTGTTATTAGGAATCATATTTTGGCTCTTTGGAGGGATAATGTTAGGATTTGGTTGACAAAGGGACAGATTAGAGAAACTGTCACTACTGAGTTTGAACCTTTGCTTAACTCTGCTTATGACTATCTTTTATATAACGGCCACATCAATTTTGGGGTTTCACCCTTGTTTATTTCCCAGTTTCCTGAGGCAAAGGAAGGGACTGTTATTGTTATTGGTGCTGGCCTTGCTGGCTTGGCTGCGGCAAGGCAGCTATTGTCCTTTGGTTATAAGGTTATGGTTTTGGAAGGTAGGAACCGTCCAGGTGGCAGGGTTTATACTCAGAAGATGGGGAAAGAGGGTAACTTTGCGGCTGTAGATCTTGGTGGGAGTGTTATTACTGGAATTCATGCTAATCCTTTAGCGGTTCTAGCACGCCAACTTTCTATTCCGCTTCATAAAGTTAGAGTTGATTGTCCTTTATACAAGCCAAACGGGGATCCGGTTGATAAGGAGTTAGATACAAATGTTGAATTTGCATTCAACAGGTTGCTTGACAAAGTTATGGAGCTGAGGAAAATTATGGGTGGGTTTGCAAGTGACACCTCACTTGGATCAGTCTTGGAGACACTCAAGGCTTTATATGCTGTGGCCCAAAGTACCGATGAGAAGCAATTATTGAATTGGCATCTTGCGAATTTAGAATATGCAAATGCTGGGTGTCTTTCAAATCTTTCGGCTGCCCATTGGGATCAGGATGATCCTTATGAAATGGGTGGTGATCATTGTTTTCTTGCTGGAGGCAATTGGAGATTGATAAAAGCTATGTGCGAAGGGGTTCCTATTTTTTATGGGAAGACCGCCAACACTATCAGATACGGAAATGAGGGTGTTGAGATTATTGTTGGAGATCAAGTTTTTCAAGCAGATTACGCCTTATGCACTGTGCCTCTCGGAGTTCTGAAAAAGAAGGCTATTAATTTTGAACCTGAATTACCTGCAAGAAAGCTGGAATCAATTGAGAGGATGGGTTTTGGGCTACTGAACAAAGTTGCTATGGTTTTTCCCCATGTGTTTTGGGGAGAAGAATCAGACACATTTGGATGTCTCAACGAAAATAGTCACGATCGTGGGGAGTTCTTTTTATTTTACAGTTACCATACTGTTTCTGGGGGCTCAACACTTATAGCACTGGTGGCTGGTGAAGCTGCACAAAACTTTGAAACCACTGATCCATCCATCTTGCTTCATCGGGTTTTGACCACTCTAAAAGGTATTTTTAATGCTAAAGGCATCACTGTGCCTGATCCAATACAGTCAATTTGTACCAGATGGGGAAGCGATCCCCTTTCTTATGGCTCATACTCCCATGTTAGTGTGCATTCATCTGGTAAGGATTATGATATACTTGCAGAAAATGTGGGGAACAGACTGTTCTTTGCAGGTGAAGCCACTAGTAGGCAGTTTCCAGCCACTATGCATGGCGCTTTCTTGAGTGGCTTAAGAGAAGCTTCACGCATTTACCAGTTAACCCATAATCAGCAAGTTAATCCTAAGAAATCCGTGCCTAAGAATGGAGGAGCGTTAAACAGGACCTTGATTAATTTATTCAAGAAGCCTGATTTGGAATCCGGGAAGTTTTCTTTCATATATGATTCTTCATCAGAAGATCTGCATTCAAAGGCGATTATGCAGATCACTTTTGGTTGTCCTGAAGAAATTTACCATGAGATATTAAACTGCTATCCCAATCCCACAGAGTTGCCAATGCAGCTTTACACTATTATCTCCCGTGAACAGGTGCAACAGATGCAGCAAATTACTGGAGAAGATAAAAAGATGTTCTCTTTTTTGACAAAGAACCTCGGGTTGAAATTTATGGGTATAAATACCTTACTTAATGCTGGCAACTCGGTTATCACTAGTATTGCTGCCTCAAGAAAAGGCAAGAGGAACCGCTCACTTACTCCACAACTTGATAATTCAAAGAAGAGTCCATGA 2262 0.416 MENPKPDGSVSRRVSLRKRVNMRSYNEGMLDDELFDKLDTSLKKKKGPKYDVNKETDTEAMIAFSLGFPIDALLDHEIRSGVVKELGGKEQNDYIVIRNHILALWRDNVRIWLTKGQIRETVTTEFEPLLNSAYDYLLYNGHINFGVSPLFISQFPEAKEGTVIVIGAGLAGLAAARQLLSFGYKVMVLEGRNRPGGRVYTQKMGKEGNFAAVDLGGSVITGIHANPLAVLARQLSIPLHKVRVDCPLYKPNGDPVDKELDTNVEFAFNRLLDKVMELRKIMGGFASDTSLGSVLETLKALYAVAQSTDEKQLLNWHLANLEYANAGCLSNLSAAHWDQDDPYEMGGDHCFLAGGNWRLIKAMCEGVPIFYGKTANTIRYGNEGVEIIVGDQVFQADYALCTVPLGVLKKKAINFEPELPARKLESIERMGFGLLNKVAMVFPHVFWGEESDTFGCLNENSHDRGEFFLFYSYHTVSGGSTLIALVAGEAAQNFETTDPSILLHRVLTTLKGIFNAKGITVPDPIQSICTRWGSDPLSYGSYSHVSVHSSGKDYDILAENVGNRLFFAGEATSRQFPATMHGAFLSGLREASRIYQLTHNQQVNPKKSVPKNGGALNRTLINLFKKPDLESGKFSFIYDSSSEDLHSKAIMQITFGCPEEIYHEILNCYPNPTELPMQLYTIISREQVQQMQQITGEDKKMFSFLTKNLGLKFMGINTLLNAGNSVITSIAASRKGKRNRSLTPQLDNSKKSP 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00224 753 SUPERFAMILY Homeodomain-like 55 155 IPR009057 -
Vivi7g00224 753 Gene3D - 58 154 IPR036388 -
Vivi7g00224 753 PANTHER FLAVIN MONOAMINE OXIDASE 162 600 - -
Vivi7g00224 753 SUPERFAMILY FAD-linked reductases, C-terminal domain 431 543 - -
Vivi7g00224 753 ProSiteProfiles SWIRM domain profile. 53 154 IPR007526 GO:0005515
Vivi7g00224 753 Pfam Flavin containing amine oxidoreductase 170 594 IPR002937 GO:0016491
Vivi7g00224 753 Pfam SWIRM domain 80 145 IPR007526 GO:0005515
Vivi7g00224 753 Gene3D - 163 593 IPR036188 -
Vivi7g00224 753 SUPERFAMILY FAD/NAD(P)-binding domain 161 596 IPR036188 -
Vivi7g00224 753 FunFam Lysine-specific histone demethylase 1A 58 157 - -
Vivi7g00224 753 Gene3D - 245 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00224 Vivi-Chr7 12805678 12809123 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Vivi7g00224 Amino_oxidase 1.2e-89 CL0063