Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06611 ATGGGTGAAGGTATAGTTGAAAAAGCTCTTAAAAGCTTAGGAAAAGGCTTCGATTTAACATCAGATTTCAGACTCAAATTCTGCAAAGGTGAAGAGCGTTTGATTCTTCTCAATGAAACTGAGAAAAGAGAACTCTCAGTACCAGGTTTTGGATCCATTAGAGATGTTTCTGTTGATATCAAATGCGATAAAGGAGACCGCACACGCTATCAATCTGATATCCTCTCGTTTACGCAGATGTCAGAGTTGTTTAATAGGAAGAGTTCAATTCCTGGGAAAATTCCAAGTGGATATTTCAACAGTGTGTTTGGGTTTGATTATGGTTCATGGGCAAGTGAAGCAGCAAACACAAAGTGTTTAGGACTTGATGGTTATTTGATAAGACTATTCAATCTTCATATCGATCCATTTCCTCTTCTTCTTTCTAAGAAAATTGTTCAAGCTGTTCCTTCTTCATGGGATCCTCCTGCACTTGCAAGATTCATAGAGAACTTTGGTACTCACATCCTTGTGGGGCTTAGCATTGGAGGCAAAGATTTATTGCTAGTCAAGCAAGACGTGTCTTCCAACTTGGGACCATCAGACCTCAAAAATCACTTGGATGAGCTTGGAGATCAGTTATTTAGTGGCACATGCAATTTCCTTCCCAAAAAGAAAGATCACAAACACAAGATTCCGCCCGCTTTCGATGTATTTGGCCCTCAAATCGCTGCCTTCAGCGGCTCTACATCCGTGTGCGCAAAAGATGGAATAACAGTGATATGTGCAAAGAGAGGAGGGGATACACAAGTAAGCAGTCATAGTGAATGGCTTCTCACAGTTCCTAACAAACCAGATGCAATTGATTTTAGCTTCATTCCAATCACTTCTCTTCTTAAAGGTGCTCCTGGTAGGGGCTTCCTATCCCATGCTATCAACCTCTATCTTAGATATAAGCCACCAATGTCAGATTTGCCATACTTTCTTGACTATCAAGCACACAAGCTTTGGGCTCCTGTTCACAATGATCTTCCTCTTGGTCCAAGTACAAACATCACTACAGTTTCACCTTTTCTCACACTCAACTTGATGGGTCCCAAACTTTATGTAAACACTGATAAGGTTACAGTTGGCAAAAGACCAATCACAGGAATGCGATTGTTTCTCGAAGGCATGAAATGCAACAGATTAGCCATACATGTAGAACATCTACTAAACACGCCGACAATGCTTAGCAATAAAATCGAGGACACGACAATATGGTCGGAAGAAATAACCGATAACCGTTTCTTCGAAGCGATAACCGGGAAGAAATTCTCTCATGTATGTACCGCGCCAGTAAAATACAATCCTGACTGGAGCACTGAAAAAAATGTGACATTCATTGTCACTGGAGCACAGCTTCATGTGAAGAAACATGACACAAAGAGTGTCCTCCATTTAAGGTTATTGTTCTCCCAGGTATCAAATTGTTTTGTTGTGAAATCAAATTGGACACAAGGCTCTTCTAGATTGTCTCAGAAATCTGGAATTTTCTCAGCATTAATAAGCACTTCAATTTCTAATAAAGACCAAAAGAAATCAACAGTTGTTATGGATTCAAGTGTGTTTCCAACAGGACCTCCAGTACCTGTGCAGACACAAAAAATGTTGAAATTTGTGGACACATCACAGTTATGTAAAGGGCCACAAGATGCTCCTGGTCATTGGTTGGTTACTGGTGCAAGATTGGTCATGGACAAAGGTAAGATATGTTTGTGGGCTAAGTTCTCTTTGTTAAATACTGGCCTGTGA 1773 0.4038 MGEGIVEKALKSLGKGFDLTSDFRLKFCKGEERLILLNETEKRELSVPGFGSIRDVSVDIKCDKGDRTRYQSDILSFTQMSELFNRKSSIPGKIPSGYFNSVFGFDYGSWASEAANTKCLGLDGYLIRLFNLHIDPFPLLLSKKIVQAVPSSWDPPALARFIENFGTHILVGLSIGGKDLLLVKQDVSSNLGPSDLKNHLDELGDQLFSGTCNFLPKKKDHKHKIPPAFDVFGPQIAAFSGSTSVCAKDGITVICAKRGGDTQVSSHSEWLLTVPNKPDAIDFSFIPITSLLKGAPGRGFLSHAINLYLRYKPPMSDLPYFLDYQAHKLWAPVHNDLPLGPSTNITTVSPFLTLNLMGPKLYVNTDKVTVGKRPITGMRLFLEGMKCNRLAIHVEHLLNTPTMLSNKIEDTTIWSEEITDNRFFEAITGKKFSHVCTAPVKYNPDWSTEKNVTFIVTGAQLHVKKHDTKSVLHLRLLFSQVSNCFVVKSNWTQGSSRLSQKSGIFSALISTSISNKDQKKSTVVMDSSVFPTGPPVPVQTQKMLKFVDTSQLCKGPQDAPGHWLVTGARLVMDKGKICLWAKFSLLNTGL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06611 590 Pfam MAC/Perforin domain 101 308 IPR020864 -
Vivi5g06611 590 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 322 IPR020864 -
Vivi5g06611 590 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 5 587 IPR044663 GO:0006952|GO:0012501|GO:2000031
Vivi5g06611 590 SMART MACPF_8 117 310 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06611 Vivi-Chr5 173175753 173183016 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06611 5 173175753 173183016 Vivi5g06611 5 173175753 173183016 ECH