Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06589 ATGGCTGGCAGTGGAAACGAACACAGACTAAGCCTTGAAGAACCTGAGAAACAGAGCCTTCTCAATCGCCACACCGAGAAGCACTTCACCGCCGGGGAGATCGTTCGTGATATCATCATCGGAGTTTCTGATGGTCTCACTGTTCCATTCGCCCTCGCGGCAGGTCTCTCTGGCGCCAATGCTACTTCTTCCATCGTTCTTACTGCCGGTATCGCCGAAGTCGCCGCCGGTGCAATCTCCATGGGTCTCGGAGGTTATTTGGCAGCAAAAGGTGAAGCTGATCATTATAATAGAGAATTGAAAAGGGAACAAGATGAAATCATTGCCCTACCAGAAACTGAAGCTGCTGAGGTGGGAGAAATATTGGCGGAATATGGGATAGAGGAACATGAATATGCACCTGTGGTGAATGCTCTGAGAAAGAATCCTCAAGCATGGCTTGATTTCATGATGAAATTTGAGTTGGGACTAGAGAAGCCAGATCCAAGGAGAGCATTGTATAGTGCAATGACAATTGCCATTGCTTATGTATTGGGCGGACTTGTTCCTCTCATTCCTTACATGTTCATTCCAAAGGCAACCGAAGCTGTTCTGGTTTCAGTAGTTGTTACTTTGATTGCTTTGTTTGTTTTTGGCTTTGTCAAAGGATGCTTCACCGGCAACAAACCCGTCAGAAGTGCTTTGGAAACTGCTCTTATCGGCGCCATTGCCTCCGCCGCTGCTTATGGTTTAGCAAAGGCTTTCCATCCATAG 753 0.4728 MAGSGNEHRLSLEEPEKQSLLNRHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKGEADHYNRELKREQDEIIALPETEAAEVGEILAEYGIEEHEYAPVVNALRKNPQAWLDFMMKFELGLEKPDPRRALYSAMTIAIAYVLGGLVPLIPYMFIPKATEAVLVSVVVTLIALFVFGFVKGCFTGNKPVRSALETALIGAIASAAAYGLAKAFHP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06589 250 Coils Coil 86 106 - -
Vivi5g06589 250 Pfam VIT family 35 245 IPR008217 GO:0005384|GO:0030026
Vivi5g06589 250 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 18 248 IPR008217 GO:0005384|GO:0030026
Vivi5g06589 250 CDD CCC1 14 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06589 Vivi-Chr5 172999787 173003083 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06589 6 246 Nodulin-like Gene Family AT3G43660 23.967 2.31e-10 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06589 5 172999787 173003083 Vivi5g06589 5 172999787 173003083 ECH