Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06579 ATGTCTGTGCCGCCGGTGCAGTGTGTATACGTAACAGAGGATTGCGTTCGCGAATGGAAGAGTGGAAACTCTTCTCTCAAGGTCTCTCAACCCGTTCCAATGCTTCGCTTTCTCTACGAACTCGCCTGGACCATGGTTCGAGGTGAATTGCCGTTTCCGAAGTGTAAAGTAGCGTTAGATTCGGTTATATTCTCGGATAAAGCTTCAGCTGAGAAAGTAGCCTCGAATTTTGCAGATATAGTGAGCCAGATGGCTCAAGATCTTACATTGTCCGGAGAGTTTCGTTCTCGTCTCATTAAACTGGCAAGATGGCTTGTAGAATCTGAATTAGTTCCAGTTAGATTACTTCAAGAACGCTGCGAGGAAGAGTTTTTGGGGGAGGCTGAATTTATCAAAATTAAGGCTCAGGAGCTTAAGGGAAAAGAGGTCAGAGTTAATACACGACTTCTTTATCAGCAAACCAAATTCAACCTTCTCAGAGAAGAGAGTGAAGGCTATGCCAAACTGGTCACTCTACTTTGTCGGGACTCTGAAGCGCCGACTCAAAAAGGATCTGCATCAACAATTGGCATTATTAAGTCATTGATTGGCCATTTTGATTTGGATCCAAACCGTGTTTTTGATATTGTACTCGAGTGTTTTGAACTTCAGCCTGATAATGATGTGTTCATAGAGCTGATTCCTATTTTTCCCAAGTCTCATGCTTCACAGATTCTTGGATTTAAATTTCAATATTATCAGCGCATGGAAGTCAGTAATCCTGTACCGTATGGGCTTTATAGACTTGCAGCCTTGCTGGTAAAGCAAGACTTTATTGATCTTGATAGCATATATGCTCATTTACTCCCCAAGAATGAAGAAGCATTTGAGCATTATAGCACTTTCTCTTCCAAGCGCCTTGATGAGGCTAATAAAATTGGAAAAATAAACCTTGCTGCTACTGGGAAGGATCTAATGGATGATGAGAAAACAGGGGATGTCACTATTGATCTTTTTGCTGCTTTAGCCGTGGAAACTGATGCAGTTGAGGAGCGGAAATCCGAGCTTCAAAATAGTCAAACTTTGGGCTTGCTTACTGGCTTTCTTTCTGTGGATGACTGGTATCATGCACATGTACTATTTGAACGTCTCTCACCACTCAATCCAGTGGAACATATCCAAATATGTGATAATTTGTTTAGGCTTATTGAGAAGTCAATTTCTTCACCGTATGATGTTATTCGTCAAGCACATCTTCAAAATCCTGGATCGTCCACTGGAGGCAGGACTGATGCTATGGACGTAGATAATCCTCCAGGACACCATTCTTTCATAGATCTTCCAAAGGAGCTTTTTCAGATGCTTTCTTGTACTGGACCTTTTCTCTACCGAGATACTATGCTGTTACAGAAGGTTTCTAGGGTTTTGAGAGGTTATTACCTTTCTGCTCTTGAGCTTGTAAGTCACGGCGACAGTGCCTTGAATTCTCAATTTCATGGTATTGGAAATCCTCACCTGCATTTGAAGGAAGCAAAACTAAGAGTGGAGGATGCTTTGGGAGCTTGTCTACTACCTTCTCTACAGTTGGTTCCTGCTAATCCAGCTGTTGGCCAGGAAATTTGGGAACTAATGAGTCTTCTTCCTTATGAGGCACGCTATCGATTATACGGTGAATGGGAAAAAGATGATGATCGCTATCCTATGCTGTTGGCTGCCAGACAAACTTCGAAGTTAGACACTAGACGTATTTTGAAGCGGCTGGCTAAGGAAAATTTAAAGCAGCTGGGTCGAATGGTTGCAAAATTAGCTCATGCCAACCCTATGACTGTCCTTCGAACAATTGTTCACCAGATTGAAGCATACAGAGATATGATTGCTCCTGTGGTGGATGCTTTTAAGTATTTGACTCAGCTTGAATATGATATATTGGAATACGTGGTTATTGAGCGATTGGCACTTGCTGGACGTGATAAGTTGAAGGATGATGGGCTTAATTTGTCAGATTGGCTTCAGTCTCTAGCTTCATTTTGGGGCCACCTATGTAAAAAGTACCCATCAATGGAGTTGCGGGGCCTTTTCCAGTATCTTGTGAACCAGCTAAAAAGGGGACAAGGAATTGAGCTTGTTCTACTGCAGGAGCTTATCCAACAAATGGCAAATGTTCAATACACAGAGAACTTGACTGAGGAACAGCTGGATTCTATGGCTGGGAGTGAGACTCTGAAATATCAAGCAACTTCCTTCGGGATGACTCGAAATAATAAGGCATTGATAAAGTCAACTAGCAGGCTTAGAGATGCATTACTTCCTAAAGATGAACCGAAGTTGGCAACCCCCCTCTTGCTTCTTCTTGCTCAGCATCGATCTCTGGTTCTCGTCAATGCAGATGCACCCTACATTAAGATGGTCAGTGAACAGTTTGATAGATGCCATGGAACTCTTCTTCAATATGTCGACTTTCTAGGCAGTGCAGTCACACCAGGATCAAATTATGCTATTCTTATTCCCTCACTTGATGACCTGGTCCATCTTTACCACTTGGATCCCGAGGTTGCTTTCTTGATATATCGCCCTGTTATGAGACTTTTCAAGTCTCAAAGATCTCCCAATGTTTGCTGGCCCTTGGATGATAGAAATGCTGCAAGTGATTCGTCTACGAACTTTGAGTCTGATCCTGCAGATCATCTTGGTAGTATGTTTCTAGATACTGGCTCCAACAAAAAACCGATTAGTTGGTCATATCTTCTTGGTACTGTTAAAACTATGTTGCCTTCAAAAGCATGGAATAGCCTATCTCCTGATCTATATGCAACATTTTGGGGTCTTACATTATATGATCTGTACGTTCCGAAAAATCGTTATGAGTCAGAAATAGCCAAGCTTCATGCTAGTCTTAAATCTTTGGAGGAGATTTCTGACAATTCAAGCTCAGCAATCACCAAGAGGAAGAAAGAAAAAGAAAGAATTCAAGAATCTCTTGACCGTCTGATTAGTGAACTGCATAAACATGAAGAAAATGTCGCATCTGTCAGCAGCCGGCTCTCTTATGCAAAAGACAAATGGTTAAGTTCCTGTCCTGATACCTTGAAGATTAATATGGAGTTTCTTCAGCGCTGTATATTTCCACGCTGTACTTTCAGTATGCCAGATGCTGTTTATTGTGCTATGTTTGTACACAAACTTCACTCCCTTGGAACTCCCTTTTTTAACACAGTCAACCACATTGATGTGCTAATTTGTAAGACCCTTCAACCAATGATATGCTGCTGCACTGAATATGAGGTTGGTAGGCTTGGCAGGTTTCTCTATGAGACTTTGAAGATAGCTTACCATTGGAAGAAAGATGAATCTATTTATGAACGTGAGTGTGGAAACATGCCGGGATTTGCTGTTTATTATCGATATCCAAATAGTCAGCGAGTTACATATGGACAGTTCATTAAGGTACACTGGAAGTGGAGTCAAAGAATCACACGGTTACTGATTCAGTGTCTGGAATCTAGCGAGTACATGGAAATTAGAAATGCTCTTATAATGTTGACTAAAATTTCTAGTGTTTTCCCAGTTACACGGAAGAGTGGCATCAACCTTGAAAAGCGGGTAGCTAAAATTAAAAGTGATGAAAGAGAGGATCTTAAGGTGTTGGCAACTGGTGTAGCAGCAGCACTGGCTGCTAGGAAGCCTTCTTGGGTGACTGATGAAGAATTTAGTATGGGTTATCTTGAGTTGAAGCCGGCACCAACTATGTCTAAATCTGCTGCAGGAAATTCTGCAGCTGTACAAAGTGGAACAGGTCTTCATGTTTCTCAAACTGAATCTGCCAGTGGGAAACATTTGGACTCGGAAAACAGAGTCAAAGACCAGACAGCAAAAATAAAATCTGCAGATGGCAAGTCAGAAAGAACTGAAAGTATTACAGTGACAAAATCTGATTCTGGCCAGGTAAAACTCAAGGGTAGCTCAATGGTGAATGGATTGGATGCTCAATCTTCTCTACCCTCACCTGCTGGACAATCCGGGGCATTAAAATCCTCGGAAAACTCAAAGCAAGTGGAAGAATCAATAAGTAGGGCACCGGATGAACATGTTACAAAAAATGTTGAGTCTAAAACCTCTGCAAAACGTTCAGTGGCTGCTGGTTCTCTTTTGAAGGCATCAAAACAAGATCCTTTGAAAGAAGATGGTAGATCTAGTAAAACTGTTGCTAGAACTTCTGGTTCCTCAAGCAGTGACAAGGATCTTCAGGCCCATGCATCAGATGGAAGACACACTGGAACAAACATCTCTTCTTCAGTCAGTGCTAATGGTAACAGTGTTTTAGGTTCTGCAAAGGGCTTGGCTCCATTGGCAAAAAATTCATTTGATGGTTCTGGTATTGAATCAAAGGCAGAGGTTGGTGCTGCCAAGTCTTCTATGGCAAAGGATGATGGAAATGATGTTGCTGACTTCGCAAGAGGATCCTCTTCTCGTGTAGTCCATTCCCCTAGACATGAAAACACGGCTACCTCGAAGTCTAGTGATAAAAGTCAGAAGCGAGCTGGTTCTGTTGATGAACTAGACAGACTAGGTAAACGGAGGAAAGGGGATGTTGATCTAAGAGATTTGGAGAGTGAAGTTCGATTCTCTGAAAGAGAGAAGCTAATGGATCCTCGACTGGTTGATGATAAAGTGGGACCAGATGAACTTGGTATGTACAGAGCAGGTGATAAGACATTGGAAAGGCCAAAAGAAAAAGGGAATGAAAGATATGAAAGGGAACACAGGGAAAGATTGGACCGACTGGACAAGTCCCGTAGTGATGACTTTATTGTAGAAAAACCTAGGGACAGGTCGATAGAAAGGTATGGAAGAGAACGATCTGTTGAGAGAATGCAAGAAAGGAGCAGTGAGAGGAATTTTAATAGACTCCCTGACAAGGCTAAGGATGACAGAAGTAAGGATGATAGAAATAAATTACGATATAATGATGCATTGATAGAAAAATCCCACGCTGAGGGCCGCTTCCATGGACAAAGCTTGCCTCCGCCACCCCCTTTACCTCCTAATATGGTTCCTCAATCTGTAGGGGCTGGTAGGCGTGATGAAGATGCTGATAGGAGGTATGGAGCTACAAGGCATTCTCAAAGACTTTCTCCAAGGCATGAAGAAAAAGAACAGAGAAGGTCTGAAGAGACTGTGATTTTGCAGGAGGATCCTAAACGTAGAAAAGATGATGATTTTCGAGATCGGAAGCGTGAAGAAATGAAGGTAGAAGAGAAGGAAAGGGAAAGAGAGAAAGCAAACATTCCTAAAGATGATTTAGATTTAAATGCTGCAACCAAGAGACGTAAACTTAAGAGGGAACATCTATCGACTATGGAGCCCGGGGAGTACTCACCAGTTGCTCCCGCACTTCCTCCCCCCAGTATTGGTATGTCACAAGCATATGATGCAAGAGACAGAAAGGGTCCAATCATCCAGCATGCTGGTTACATAGATGAACCTAGTCTTAGGATTCATGGTAAGGACGTAGCCAACAAGCTGAATCGTCGTGACATAGATCCCTTATATGACCGGGAATGGGATGATGAGAAGAGACAAAGAGCTGATCAAAAGCGAAGGCATCGGAAGTAA 5592 0.4226 MSVPPVQCVYVTEDCVREWKSGNSSLKVSQPVPMLRFLYELAWTMVRGELPFPKCKVALDSVIFSDKASAEKVASNFADIVSQMAQDLTLSGEFRSRLIKLARWLVESELVPVRLLQERCEEEFLGEAEFIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKGSASTIGIIKSLIGHFDLDPNRVFDIVLECFELQPDNDVFIELIPIFPKSHASQILGFKFQYYQRMEVSNPVPYGLYRLAALLVKQDFIDLDSIYAHLLPKNEEAFEHYSTFSSKRLDEANKIGKINLAATGKDLMDDEKTGDVTIDLFAALAVETDAVEERKSELQNSQTLGLLTGFLSVDDWYHAHVLFERLSPLNPVEHIQICDNLFRLIEKSISSPYDVIRQAHLQNPGSSTGGRTDAMDVDNPPGHHSFIDLPKELFQMLSCTGPFLYRDTMLLQKVSRVLRGYYLSALELVSHGDSALNSQFHGIGNPHLHLKEAKLRVEDALGACLLPSLQLVPANPAVGQEIWELMSLLPYEARYRLYGEWEKDDDRYPMLLAARQTSKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMIAPVVDAFKYLTQLEYDILEYVVIERLALAGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELIQQMANVQYTENLTEEQLDSMAGSETLKYQATSFGMTRNNKALIKSTSRLRDALLPKDEPKLATPLLLLLAQHRSLVLVNADAPYIKMVSEQFDRCHGTLLQYVDFLGSAVTPGSNYAILIPSLDDLVHLYHLDPEVAFLIYRPVMRLFKSQRSPNVCWPLDDRNAASDSSTNFESDPADHLGSMFLDTGSNKKPISWSYLLGTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIAKLHASLKSLEEISDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVSSRLSYAKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHKLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLYETLKIAYHWKKDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFSMGYLELKPAPTMSKSAAGNSAAVQSGTGLHVSQTESASGKHLDSENRVKDQTAKIKSADGKSERTESITVTKSDSGQVKLKGSSMVNGLDAQSSLPSPAGQSGALKSSENSKQVEESISRAPDEHVTKNVESKTSAKRSVAAGSLLKASKQDPLKEDGRSSKTVARTSGSSSSDKDLQAHASDGRHTGTNISSSVSANGNSVLGSAKGLAPLAKNSFDGSGIESKAEVGAAKSSMAKDDGNDVADFARGSSSRVVHSPRHENTATSKSSDKSQKRAGSVDELDRLGKRRKGDVDLRDLESEVRFSEREKLMDPRLVDDKVGPDELGMYRAGDKTLERPKEKGNERYEREHRERLDRLDKSRSDDFIVEKPRDRSIERYGRERSVERMQERSSERNFNRLPDKAKDDRSKDDRNKLRYNDALIEKSHAEGRFHGQSLPPPPPLPPNMVPQSVGAGRRDEDADRRYGATRHSQRLSPRHEEKEQRRSEETVILQEDPKRRKDDDFRDRKREEMKVEEKEREREKANIPKDDLDLNAATKRRKLKREHLSTMEPGEYSPVAPALPPPSIGMSQAYDARDRKGPIIQHAGYIDEPSLRIHGKDVANKLNRRDIDPLYDREWDDEKRQRADQKRRHRK 1863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06579 1863 Coils Coil 1734 1754 - -
Vivi5g06579 1863 MobiDBLite consensus disorder prediction 1455 1807 - -
Vivi5g06579 1863 PANTHER THO2 PROTEIN 5 1754 IPR040007 GO:0000347|GO:0006397|GO:0006406
Vivi5g06579 1863 Pfam THO complex subunit 2 N-terminus 36 590 IPR032302 -
Vivi5g06579 1863 MobiDBLite consensus disorder prediction 1244 1426 - -
Vivi5g06579 1863 MobiDBLite consensus disorder prediction 1270 1298 - -
Vivi5g06579 1863 MobiDBLite consensus disorder prediction 1299 1345 - -
Vivi5g06579 1863 MobiDBLite consensus disorder prediction 1832 1863 - -
Vivi5g06579 1863 Pfam Transcription factor/nuclear export subunit protein 2 921 1215 IPR021418 -
Vivi5g06579 1863 MobiDBLite consensus disorder prediction 1684 1779 - -
Vivi5g06579 1863 MobiDBLite consensus disorder prediction 1346 1362 - -
Vivi5g06579 1863 MobiDBLite consensus disorder prediction 1244 1269 - -
Vivi5g06579 1863 MobiDBLite consensus disorder prediction 1393 1426 - -
Vivi5g06579 1863 Coils Coil 944 964 - -
Vivi5g06579 1863 MobiDBLite consensus disorder prediction 1832 1855 - -
Vivi5g06579 1863 MobiDBLite consensus disorder prediction 1493 1660 - -
Vivi5g06579 1863 Pfam Transcription- and export-related complex subunit 592 667 IPR021726 -
Vivi5g06579 1863 Coils Coil 972 1006 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06579 Vivi-Chr5 172740404 172761266 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06579 5 172740404 172761266 Vivi5g06579 5 172740404 172761266 ECH