Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04453 ATGGCGGAAGCTCTCTCGGTGATGCCGGCGGCCGTGCTCCGTAATCTCGCCGATAAACTCTATGAGAAACGCAAAAATGCTGCTCTCGAGGTTGAGGGGATTGTGAAGCAGCTTGCTTCTGCTGGTGATCATGATAAGATAACCTCTGTGATTACTTTGTTGACTACGGAATTCACTTATTCACCTCAAGCAAATCATCGCAAGGGAGGGTTGATAAGCTTAGCTGCTGCTACGGTTGGGTTGACTAATGAAGCTGCTCAACATCTTGAGCAAATTGTGCCTCCTGTGTTAAATTCTTTCTCGGACCAAGATAGCAGAGTTCGTTATTACGCCTGTGAAGCACTATATAACATTGCCAAGGTTGTGAGAGGAGATTTTATTGTATTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGATTCAGATGCCAATGTACAAAGTGCTGCACATCTCTTGGATCGACTCGTAAAGGATATTGTGACCGAAAGTGATCAGTTCAGTATTGAAGAGTTTATACCATTATTGAGGGAGCGCATGAATGTACTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTTTTGGACAGTGTACCAGATATTGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGTTGAGCGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATAAAGAACTCCCCATCTGTAGATTATGGCCGAATGGCTGAAATACTGGTACAAAGGGCTAGTTCTCCAGATGAATTTACTAGGTTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGCATATCCGATAAAGAAGAGAAAATTAGAGTGGTTGCCCGGGAAACCAATGAAGAGCTACGAGCAATCAATGCTAATCCAGCTGAAGCGTTTGATGTAGGAGCAATCCTCTCCATTGCAAGGAGGCAACTATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCATTGGATATCAATCCTCCTAAACAGACACCGTATTGAGGTTTTGATATACCTGAATGACATATTTGACACCCTACTCAAAGCACTTTCAGATCCATCTGATGAGGTTGTTCTTTTAGTTCTTGATGTTCATGCATGCATTGCAAAAGACCCTCAGCACTTCCGACATCTTGTCGTTTTCCTTGTGCACAGTTTCAGGCTAGATCACTCTCTTTTGGAGAAGCGTGGTGCTTTGATAATTCGCCGCCTTTGTGTGCTTTTGAATGCTGAGAGAGTCTACCGTGAACTTTCTACGATATTAGAAGGAGAATCAGATTTAGATTTTGCATCAATTATGATTCAGGCATTGAATTTGATCTTACTTACATCATCAGAATTGTCTGAGATTCGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCTGGGAAGGACTTGTATGTTTCCTTGTATGCCTCTTGGTGTCATTCTCCAATGGCAATTATAAGTCTCTGCTTCTTAGCTCAGACTTACCGACATGCAAGTACTGTGATTCAATCTCTGATAGAGGAGGATATAAATGTCAAGTTTTTGGTCCAGCTGGATAAATTGATTCGCTTGCTGGAAACTCCAATCTTTGCTTATCTTAGATTGCAGCTTCTTGATCCTGGAAGATATTTATGGCTATTCAAAGCGTTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCAGCCTTTAAGATACTAAAAACTCGTTTAAAAGCTGTGCCGTCATATTCTTTCAATCGCGAGCAATTGAATAGAATGCCTTCTGGGGATTACTACGAATTTCTTCCTCAGATGCCTGATGAACATAAAAAAAAAGATGGTGATGCAACTGAAGATGGTGGGAGCTCATATAATAGATTAAACTTTACTGAAAGGTTAAATGAGTTTCAGGAAATGCAGAAGAAACATCGGGTTCACACCAAATCCCAAAGAACGACACGCAGTTTAACGACTTCATTACCAAAGGAGGCACCAAAAGAGGAAGAAGAGCCACAGAGACAACAGTCTATTGATCAGTCTATTGATCTTAATGTTCCTCCTTCAAGATCTAGGAGAAATTCAGGGCAACTACAACGATAA 2184 0.4107 MAEALSVMPAAVLRNLADKLYEKRKNAALEVEGIVKQLASAGDHDKITSVITLLTTEFTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRASSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAINANPAEAFDVGAILSIARRQLSSEWEATRIEALHWISILLNRHRIEVLIYLNDIFDTLLKALSDPSDEVVLLVLDVHACIAKDPQHFRHLVVFLVHSFRLDHSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMIQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYRHASTVIQSLIEEDINVKFLVQLDKLIRLLETPIFAYLRLQLLDPGRYLWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNREQLNRMPSGDYYEFLPQMPDEHKKKDGDATEDGGSSYNRLNFTERLNEFQEMQKKHRVHTKSQRTTRSLTTSLPKEAPKEEEEPQRQQSIDQSIDLNVPPSRSRRNSGQLQR 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04453 727 MobiDBLite consensus disorder prediction 689 703 - -
Vivi4g04453 727 PANTHER TAX1 BINDING PROTEIN-RELATED 7 687 IPR026825 GO:0006661|GO:0070772
Vivi4g04453 727 FunFam ARM repeat superfamily protein 7 125 - -
Vivi4g04453 727 FunFam protein VAC14 homolog isoform X1 249 410 - -
Vivi4g04453 727 MobiDBLite consensus disorder prediction 704 727 - -
Vivi4g04453 727 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Vivi4g04453 727 FunFam protein VAC14 homolog 126 248 - -
Vivi4g04453 727 MobiDBLite consensus disorder prediction 624 653 - -
Vivi4g04453 727 MobiDBLite consensus disorder prediction 631 647 - -
Vivi4g04453 727 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Vivi4g04453 727 Gene3D - 2 250 IPR011989 -
Vivi4g04453 727 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Vivi4g04453 727 Gene3D - 251 479 IPR011989 -
Vivi4g04453 727 MobiDBLite consensus disorder prediction 667 727 - -
Vivi4g04453 727 SUPERFAMILY ARM repeat 11 548 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04453 Vivi-Chr4 171490488 171500549 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04453 4 171490488 171500549 Vivi4g04453 4 171490488 171500549 ECH