Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04433 ATGGCTGAAGAATCAGACTACACACTCACCCAATTCAAAAACTCTGTCACAAAACTTGGTTCATCTACACAGGGTTATGGGGACGCTACACTGATGAGGTTTCTGATTGCTCGGTCAATGGATTCCGATAAAGCAGCCAAGATGTTTGTTCAATGGCGTAAGTGGAGAGATACTATGGTTCCTAATGGGTTCATTTCAGATTCTGAAGTTCCTGATGAGTTGGAAACTAGAAAGATCTTTTTGCAGGGTTTGTCTCAAGATAAGTTTCCTCTCATGATTGTTCAAGCATGTAGACACTTTCCTTCCAAAGATCAGAATCAATTCAAGAAATTTATAGTACATTTACTCGACAAGACAATTGCGAGTGCTTTTAAAGGAAGGGAGATAGGAAATGAGAAGTTGATTGGAGTTCTTGATCTGCAGAATATTGGTTATAAGAATGTTGATGCGCGTGGTTTAATTACAGGATTTCAATTTTTACAGAGTTACTACCCTGAACGTTTAGCAAAGTGCTATATTTTACATATGCCATGGTTTTTTGTGAGTGTTTGGAGATTAGTTTCTAGCTTCCTAGACAAGGCAACACAAGAAAAGATTGTAATCATAAGCAATGAAGATGAGAGAAAGAAGTTCATAGATGAAGTTGGTGAAGAGATTCTCCCAGAAGAGTATGGTGGAAGAGCAAAGCTTGTAGCTATCCAAGATTTTGAAGTGACACCACAGGAAAATGGAAGAACAAATTGA 744 0.3804 MAEESDYTLTQFKNSVTKLGSSTQGYGDATLMRFLIARSMDSDKAAKMFVQWRKWRDTMVPNGFISDSEVPDELETRKIFLQGLSQDKFPLMIVQACRHFPSKDQNQFKKFIVHLLDKTIASAFKGREIGNEKLIGVLDLQNIGYKNVDARGLITGFQFLQSYYPERLAKCYILHMPWFFVSVWRLVSSFLDKATQEKIVIISNEDERKKFIDEVGEEILPEEYGGRAKLVAIQDFEVTPQENGRTN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04433 247 PANTHER OS03G0850700 PROTEIN 4 235 - -
Vivi4g04433 247 SUPERFAMILY CRAL/TRIO N-terminal domain 8 65 IPR036273 -
Vivi4g04433 247 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Vivi4g04433 247 CDD SEC14 71 226 IPR001251 -
Vivi4g04433 247 SMART sec14_4 73 229 IPR001251 -
Vivi4g04433 247 Gene3D - 1 243 IPR036865 -
Vivi4g04433 247 SUPERFAMILY CRAL/TRIO domain 67 229 IPR036865 -
Vivi4g04433 247 Pfam CRAL/TRIO domain 75 226 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04433 Vivi-Chr4 171125811 171129159 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04433 24 213 Acyl Lipid Metabolism Gene Families AT1G55840 23.923 1.73e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04433 4 171125811 171129159 Vivi4g04433 4 171125811 171129159 ECH