Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04429 ATGGGGAAAAGTAAGACAGTTGAGTTGTATGGATTCCCTACTCATGTGAACGTGTCTGATGTGAAGAGATTTGTAGAGAAGCTTACTGGTGAAGGAAGTGTCTTTGCTATGAAGGTTAGAGTAGGCAAAGGCCGGAGTCCTAGAGCGTTTGCAATTATTCAATTCACTGCTGCTAAACATGCTACATATATGATGGCGTTACTTAGCGGAAATCCGTCGGCATTGTGGTATGGGAGCTCCTATTTAAAAGTCCGGGAAATGGAAAGGGATATTGATTCGAAGCCAAAGGAAGTTGAAGACAGTTTGGATGATGTGAAACTGTACTTTGGCTGTCAGATTTCGAAGGAAAGATTCTCCGTTTTATGGATAAAGGAGGATGTTTCTGTAGTTTTTGGGAGTGGAACGAGAAAATGGCGTTTCTCTATGCGCCATGGTGATAAGAAGTTCAGACTTGACCTTTCGTATGAGAACATTTGGAAGATTGAGCTACGTCAACCACGGGGTGAAATTGTAAAGTATCTCCTGATACAGTTAATTGGTGCTCCTCGGGTTTTTGAGCTTTATATTCCTACTTCAACAAGTGCAACAAGTGTATATGATGATCCTTTGATGAACTATTGTAGAGATGACCAATGGATCCGTGCAATAGATTTCACTCCTTGCAGCTGTATTGGTCAGTCTTCTGTTTTATGCCTAGAGCTTCCTAGTGACAGAGATTTACCGAATTTCCGGGAAAACTTTGCACATTATGAGGAAAGTGATGGTCAATACAGATTGGAGAGTGGATCACCTTTTTCATCCAATCCGGATATTGTTCCCATGGTTGCTCCTCCTCGAGGAATTCAAATTCCATTTGACATCTTGTTCAAAGTTAATTCGTTGGTTCAGCACGGGTGTCTTTCAGGTTCTGAACTCGATAATGATTTCTACCGTCTAGTTGATCCACTTAAAATAAATGTCGTGTATATCGAGCATGCTTTAGAAAGGATGTTCTTTTCAAAGGATTTCTGTTATGAACCTGCAAGATGGCTGAAAGATCAGTACAGACTTAGTGCAAAAAACCCGCCTCGGTCACCATCTATATCGTTGGATAACGGATTGGTATATGTTCGCAGGGTTCAGATAACACCATGCAAAGTATACTTTTCTGGTCCAGAGATTAATGTCTCGAATCGTGTTCTCCGCCATTTCCATGAGCATATTGATAACTTTCTGCGTGTTTCATTTGTTGACGAGGAAATGGATAAACTGTATTCAGCAGATTTATCCACACGTATTTCTGAGATTGGGAAAACTGAGATATACTGTAGGATTCTTTCCATCCTTAGAAATGGCTTAGATATTGGTGGTAGGAAGTTTGAATTTCTTGCTTTCTCATCTAGTCAGTTGCGTGAAAATTCGCTATGGATGTTTGCTCGTACAACAACTGGAGTTACTGCCAATTCCATAAGGGAATGGATGGGAGATTTTAGCCGGATAAAAAATGTGGCTAAATATGCTGCTAGACTCGGACAATCTTTTGGTTCATCTACTGAAACTCTAAGCGTCAGCAGATACGAAATTGAGACTATTCCTGATGTGAAGGTTAAAAATACTGAATATGTCTTCTCTGATGGAATTGGGAAAATATCTCTTGAGCTTGCCAGGAGAGTGGCTAAAAAATGTGGTTATGATTCTATGCCATCCGCCTTTCAGATTCGGTACGGCGGGTACAAAGGAGTTGTGGCTGTTGATCCAACCTCATATTGGAAGTTGTCACTGAGGGAGAGCATGCACAAGTATGATTCAGAGAATGAAAAACTTGATGTTTTAGCATGTAGTAAGGTTCAGCCTTGTTATCTGAATCGACAATTGATTACTCTCTTATCAACTCTCGATGTCAAGGACAGTGTTTTCGAGAAAAGACAGAAAGAAGCTGTTGATCAACTCAACACTATACTAACAGATTCAACAAAGGCACATGAGGTTTTGGACTTGATGTCTTCCGGGGAGGTCACTAATATTCTGAAGGAGATGCTTATTTGTGGCTACAAGCCTAATGTTGAACCATTTCTATCAATGATGCTGCAGACATTTAGGGCATCAAAGTTATTGGAATTGCGACAAAAAACTAGGATATTTATTCCAAAGGGAAGAGCAATGATGGGTGTTCTAGATGAAACTAAAACCCTTGAATATGGTGAAGTTTTTGTTCAATATTCTTACGACAGGTTCAGCAACCATTCTCATGTAGTTAAAGGCAAGGTCGTAGTAGCGAAAAACCCCTGCTTGCACCCGGGTGATGTTCGTGTTTTGAAGGCTGTTGATGTGCCAGATTTGCGCCACATGGTGGATTGTGTTGTTTTCCCTCAAAAAGGTCACAGGCCACATCCAAATGAATGCTCGGGAAGTGATCTTGACGGGGACATCTACTTTGTTTGTTGGGATTCTGAATTGATTCCACCTAAAACAATTGATCCAATGGAGTATGATACTGCCCAACCTAAAGTATTGGATCATGATGTTGAGATTGAGGAAGTGGAAGAGTATTTTGCAAATTACTTGGTCAATGACAGTCTTGGAATAATTGCCAATGCACACACTGTCCATGCAGATAGAGAGCCCGAAAAAGCAATGTCTGATCCATGTATTAGACTTGCAAAACTGTTCTCAGTAGCAGTTGACTTCCCTAAAACTGGTATTCCAGCAGAAATACCCCGCGAACTTTTCGCCAAAGAATATCCAGACTTCATGGAGAAGCATGACAAAACAACCTACAGATCAGAAAATGTAATAGGAAAACTTTTTAGAGAAATTCAAGGAATTTCAACAAAAGATGGTTCTATTACATCCTTCACATTTGAACTGGCTAAAAAGTCGTACGATCCCGACATGGAATTCGACGGCTTTATGGATTATGTCGATGATGCCTTCTATTACAAATCCAATTATGACTACAAGTTGGGAAATCTGATGGACTACTACGGTATCAAAACTGAATCAGAAATTCTAAGTGGGAATATCATGAAAATGTCGAAATCTTTCACCAAAAGAAGGGATGCTGATGCGATAACTATGGCTGTAAGGTCCCTAAGGAAAGAGGCGAGGAGTTGGTTCAATGACGGTTCAGATTCTGGAGGTGATGATGCATATGCAAAAGCTTCTGCTTGGTATCATGTCACTTACCATCATAGTTACTATGGTTTGTACAATGAAGGTATGAAGAGGGACCATTTTCTAAGCTTTCCATGGTGCGTTTACCATTTGCTTGTCCAAATCAAGAAGGGGAATGCAAGCATGAGGATGCATTCTAGCATGGAGCAAAGTTTCAGCCGCAGGTTGCGTCTTGATTAA 3333 0.405 MGKSKTVELYGFPTHVNVSDVKRFVEKLTGEGSVFAMKVRVGKGRSPRAFAIIQFTAAKHATYMMALLSGNPSALWYGSSYLKVREMERDIDSKPKEVEDSLDDVKLYFGCQISKERFSVLWIKEDVSVVFGSGTRKWRFSMRHGDKKFRLDLSYENIWKIELRQPRGEIVKYLLIQLIGAPRVFELYIPTSTSATSVYDDPLMNYCRDDQWIRAIDFTPCSCIGQSSVLCLELPSDRDLPNFRENFAHYEESDGQYRLESGSPFSSNPDIVPMVAPPRGIQIPFDILFKVNSLVQHGCLSGSELDNDFYRLVDPLKINVVYIEHALERMFFSKDFCYEPARWLKDQYRLSAKNPPRSPSISLDNGLVYVRRVQITPCKVYFSGPEINVSNRVLRHFHEHIDNFLRVSFVDEEMDKLYSADLSTRISEIGKTEIYCRILSILRNGLDIGGRKFEFLAFSSSQLRENSLWMFARTTTGVTANSIREWMGDFSRIKNVAKYAARLGQSFGSSTETLSVSRYEIETIPDVKVKNTEYVFSDGIGKISLELARRVAKKCGYDSMPSAFQIRYGGYKGVVAVDPTSYWKLSLRESMHKYDSENEKLDVLACSKVQPCYLNRQLITLLSTLDVKDSVFEKRQKEAVDQLNTILTDSTKAHEVLDLMSSGEVTNILKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPKGRAMMGVLDETKTLEYGEVFVQYSYDRFSNHSHVVKGKVVVAKNPCLHPGDVRVLKAVDVPDLRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPPKTIDPMEYDTAQPKVLDHDVEIEEVEEYFANYLVNDSLGIIANAHTVHADREPEKAMSDPCIRLAKLFSVAVDFPKTGIPAEIPRELFAKEYPDFMEKHDKTTYRSENVIGKLFREIQGISTKDGSITSFTFELAKKSYDPDMEFDGFMDYVDDAFYYKSNYDYKLGNLMDYYGIKTESEILSGNIMKMSKSFTKRRDADAITMAVRSLRKEARSWFNDGSDSGGDDAYAKASAWYHVTYHHSYYGLYNEGMKRDHFLSFPWCVYHLLVQIKKGNASMRMHSSMEQSFSRRLRLD 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04429 1110 Pfam RNA dependent RNA polymerase 375 932 IPR007855 GO:0003968
Vivi4g04429 1110 PANTHER RNA-DEPENDENT RNA POLYMERASE 4 1096 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04429 Vivi-Chr4 171077419 171082766 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04429 4 171077419 171082766 Vivi4g04429 4 171077419 171082766 ECH