Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04423 ATGGTTTCAAGATCTTATTCAAATCTAGTAGAGTTAGCTTCTGGTGAACCTTCATCATTTGGTTTGATGAATAGGAGAATTCCAAGGATTATGACTGTTGCTGGAGTGATATCTGATGTTATTGTTGATGATGATCAAGTGGAGAGTGTTGCTTCGGATATCTCTTCGTCTTCGGTACACCGGGACCGGATTATAATTGTGGCGAATCAGCTTCCTATTAAGGCTCACAAGAATCAAGATGGTGATAGGAGTTTTTGGTCTTTTGATTGGGATGAAAATTCACTTCTTCAATTGAAAGATGGAATAGGGGATGATGATATTGAGATTATTTATGTTGGATGCTTAAAAGAAGATGTTCATCCAAATGAACAAGATGAGGTATCAATGATGCTTCTTGAGAATTACAAATGTGTCCCTACTTTTCTTCCGCCGGAGATGTTTACTAAGTACTATCATGGTTTTTGCAAACAACAATTATGGCCATTGTTTCATTACATGTTGCCGTTATCACCCGAGCTTGGTGGTAGGTTTAATCGGTCTTTATGGCAAGCTTATGTATCGGTTAATAAGATTTTTGCTGATAGGATTATGGAAGTTATTAACCCGGAAGATGATTTTGTTTGGATACATGATTATCATCTTATGGTGTTACCGACTTTCTTGAGGAAGAGGTTTAATCGGGTGAAACTTGGATTTTTCCTTCATAGTCCATTTCCTTCATCGGAAATTTACAAAACATTGCCTATTAGGGAGGAGCTATTGAGAGCTTTACTTAATTCGGATTTGATCGGGTTTCATACGTTTGATTATGCACGGCATTTCCTCTCGTGTTGTAGTCGGATGCTAGGTCTTACCTACGAATCCAAGCGGGGGTATATCGGAATTGAGTATTATGGTAGGACTGTTAGTATCAAGATTCTTCCGGTTGGTATACACATGGGTCAGATTCAATCGGTTTTAAGGTTAAAAGAAACTGAGGAAAAAGTTTGCGAGCTGATTCGACAGTTTTTGGATCAAGGAAGGACAATGTTGCTTGGTGTAGATGATATGGATATATTCAAGGGAATAACTTTGAAGCTTTTGGCAATGGAGCAGCTTCTCATTCAGCATCCAGAGTATCGAGGAAAAGTGGTATTAGTTCAGATAGCGAATCCTGCTAGGGGGCGAGGAAAAGATGTGCAAGAAATGCAAGATGAGACGAAGGCAACGGTAAAACGGATCAACGAAACGTTTAGGGAACCAGGGTACGATCCTGTTATTTTGATTGACGAGCCATTAAAGTTTTATGAAAGAGTTGCTTATTATGTTGTTGCCGAGTGTTGTTTAGTCACTGCGGTAAGGGACGGAATGAATCTCATACCGTACGAATATATAGTCAGCCGTCAAGGAAATGAAACTTTGGATAAAGTTTTGAAGATAGGTTCCTCCCCTAAGAAAAAGAGCATGTTAGTTGTGTCTGAATTCATTGGTTGTTCACCGTCTTTAAGCGGCGCAATCAGAGTGAACCCTTGGAACATTGATGCCGTGGCCGATGCAATGGATTCTGCGTTAGGAATGGCCGATTCGGAAAAACAGCTTCGACATGAAAAGCATTATAGATATGTTAGTACTCATGATGTCGGGTATTGGGCGCGTAGCTTTTTACAGGATTTGGAAAGGGCTTGTAGCGATCATGTACAACGAAGGTGGTGGGGAATTGGGTTTGGATTAAGTTTTAAAGTCGTAGCACTTGATCCAAACTTTAGGAAGCTCTCAATGGATCACATAGTTTCAGCTTACAAACGGACGGCAAATAGAGCTATCCTTCTAGACTACGACGGTACACTAATGCCTCAGGTTTCCATCGATAAGAGTCCAACAGATAAAACCATTGAAATTCTTAATAGCTTGTGTAGAGATAAGAACAACATGGTATTTCTTGTTAGTGCGAGAAGCCGAAAGATACTCTCGGAATGGTTTTCTCCTTGTGAGAATATAGGAATCGCGGCTGAGCACGGTTACTTTCTGAGAATGAAGCGAGACGACGAATGGGAAACCTGTGTTCCTGCAACCGATTGTAGTTGGAAACAAATCGCAGAGCCTGTTATGAAACTTTATACCGAAACAACTGATGGATCCACCATTGAAGATAAAGAGACTGCACTTGTTTGGTGGTATGAGGATGCAGATCCAGATTTCGGATCATGCCAAGCTAAAGAACTTCTCGATCATCTCGAAAGCGTGCTGGCAAATGAACCGGTGACTGTGAAAAGTGGCCAGAATTATGTCGAGGTTAAACCACAGGGTGTGAGCAAGGGAATAGTGGCGAAACGTCTACTTTCATCGATGGAAGAAAAGGGAATGTCACCTGACTTTGTTTTGTGCATAGGAGACGACAGATCCGACGAAGACATGTTCGAGGTAATCACGAGCTCGATGAACGGTCCAATAGCACCGAAAGCGGAAGTATTTGCTTGCACGGTTTGTCGGAAACCGAGTAAGGCTAAGTACTATCTTGATGATACTGCTGAAATAGTGAGATTGATTCAAGGCTTAGCTTGTGTTTCAGATCAGAAAGTCTTAAGCTAA 2568 0.4108 MVSRSYSNLVELASGEPSSFGLMNRRIPRIMTVAGVISDVIVDDDQVESVASDISSSSVHRDRIIIVANQLPIKAHKNQDGDRSFWSFDWDENSLLQLKDGIGDDDIEIIYVGCLKEDVHPNEQDEVSMMLLENYKCVPTFLPPEMFTKYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQIQSVLRLKETEEKVCELIRQFLDQGRTMLLGVDDMDIFKGITLKLLAMEQLLIQHPEYRGKVVLVQIANPARGRGKDVQEMQDETKATVKRINETFREPGYDPVILIDEPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNETLDKVLKIGSSPKKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALGMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERACSDHVQRRWWGIGFGLSFKVVALDPNFRKLSMDHIVSAYKRTANRAILLDYDGTLMPQVSIDKSPTDKTIEILNSLCRDKNNMVFLVSARSRKILSEWFSPCENIGIAAEHGYFLRMKRDDEWETCVPATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWWYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNYVEVKPQGVSKGIVAKRLLSSMEEKGMSPDFVLCIGDDRSDEDMFEVITSSMNGPIAPKAEVFACTVCRKPSKAKYYLDDTAEIVRLIQGLACVSDQKVLS 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04423 855 Gene3D - 598 714 IPR023214 -
Vivi4g04423 855 Gene3D - 728 854 IPR023214 -
Vivi4g04423 855 FunFam Alpha,alpha-trehalose-phosphate synthase 319 536 - -
Vivi4g04423 855 Pfam Glycosyltransferase family 20 63 552 IPR001830 GO:0003824|GO:0005992
Vivi4g04423 855 Pfam Trehalose-phosphatase 602 835 IPR003337 GO:0003824|GO:0005992
Vivi4g04423 855 NCBIfam HAD-IIB family hydrolase 601 802 IPR006379 -
Vivi4g04423 855 CDD GT20_TPS 63 552 IPR001830 GO:0003824|GO:0005992
Vivi4g04423 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 555 - -
Vivi4g04423 855 CDD HAD_TPP 600 840 - -
Vivi4g04423 855 Gene3D Glycogen Phosphorylase B; 55 317 - -
Vivi4g04423 855 Gene3D Glycogen Phosphorylase B; 318 536 - -
Vivi4g04423 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 846 IPR001830 GO:0003824|GO:0005992
Vivi4g04423 855 SUPERFAMILY HAD-like 599 846 IPR036412 -
Vivi4g04423 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 598 715 - -
Vivi4g04423 855 FunFam Trehalose-6-phosphate synthase 10 729 855 - -
Vivi4g04423 855 NCBIfam trehalose-phosphatase 598 845 IPR003337 GO:0003824|GO:0005992
Vivi4g04423 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04423 Vivi-Chr4 171024479 171027947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04423 1 851 Trehalose Biosynthesis Gene Families AT1G68020 79.653 0.0 1427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04423 4 171024479 171027947 Vivi4g04423 4 171024479 171027947 ECH