Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03820 ATGGCAGCAACATTCATCTCTCGCATTTCACTTCTTCACCCAAACCCATCTCCTTCTCTCAACCCCAATCAATCTCCTTGCTTTCACCAGCCTCTCACAAACCACAAACAATTTCCCTCAAGTTTACGGTTTGAGGCGAAGAGGGCTAATGGGGTTGTGCTGAAAGCGGCTTCTGGTGCATTGGAAGTCAATTCGAAGCAAAGTGTTTCAGTTGCAAAATCCAATGATCCAATTGTTGTTATTGATAATTATGACAGCTTTACCTATAATCTTTGTCAGTATATGGGCGAGTTAGGATATCACTTTGAAGTCTACCGAAATGACGAGTTGACTATCGAGGATTTGAAAAGAAAAAATCCAAGAGGAGTGCTGATTTCACCTGGGCCAGGAACACCTCAAGATTCGGGCATATCTTTGCAAACCGTTTTGGAACTTGGACCAACTGTACCTGTGTTTGGTGTATGCATGGGATTGCAGTGCATGGGAGAGGCTTTTGGCGGGAAAATTGTCCGTTCTCCATATGGTGTGATGCATGGAAAAAGCTCTCTGGTTTATTATGACGAAAAAGGAGAAGATGGGTTACTTGCTGGACTACCAAATCCTTTCTTGGCTGGAAGATATCACAGCCTTGTGATTGAAAAGGAGAGCTTTCCTCATGAAGAACTCGAGGTAACTGCATGGACTGAAGATGGTCTCATAATGGCTGCTCGCCACAAGAAATATCGGCATGTGCAGGGTGTTCAGTTTCATCCAGAGAGCATTATAACTCCTGAAGGCAAGACGATTGTCCGCAACTTTGTGAAGCTTATAGAGAAAAGGGAGGCTACCAGTTCTTGA 837 0.4397 MAATFISRISLLHPNPSPSLNPNQSPCFHQPLTNHKQFPSSLRFEAKRANGVVLKAASGALEVNSKQSVSVAKSNDPIVVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTIEDLKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPVFGVCMGLQCMGEAFGGKIVRSPYGVMHGKSSLVYYDEKGEDGLLAGLPNPFLAGRYHSLVIEKESFPHEELEVTAWTEDGLIMAARHKKYRHVQGVQFHPESIITPEGKTIVRNFVKLIEKREATSS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03820 278 SUPERFAMILY Class I glutamine amidotransferase-like 78 272 IPR029062 -
Vivi4g03820 278 FunFam Anthranilate synthase beta subunit 1 76 269 - -
Vivi4g03820 278 CDD GATase1_Anthranilate_Synthase 78 267 IPR006221 -
Vivi4g03820 278 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 78 268 IPR006221 -
Vivi4g03820 278 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 77 276 - -
Vivi4g03820 278 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 64 274 - -
Vivi4g03820 278 Pfam Glutamine amidotransferase class-I 79 267 IPR017926 -
Vivi4g03820 278 Gene3D - 75 269 IPR029062 -
Vivi4g03820 278 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 120 134 - -
Vivi4g03820 278 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 150 166 - -
Vivi4g03820 278 PRINTS Anthranilate synthase component II signature 150 161 - -
Vivi4g03820 278 PRINTS Anthranilate synthase component II signature 123 132 - -
Vivi4g03820 278 PRINTS Anthranilate synthase component II signature 176 184 - -
Vivi4g03820 278 PRINTS Anthranilate synthase component II signature 78 92 - -
Vivi4g03820 278 PRINTS Anthranilate synthase component II signature 199 211 - -
Vivi4g03820 278 PRINTS Anthranilate synthase component II signature 246 259 - -
Vivi4g03820 278 PRINTS Glutamine amidotransferase superfamily signature 150 161 - -
Vivi4g03820 278 PRINTS Glutamine amidotransferase superfamily signature 246 259 - -
Vivi4g03820 278 PRINTS Glutamine amidotransferase superfamily signature 123 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03820 Vivi-Chr4 157402176 157405354 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03820 4 157402176 157405354 Vivi4g03820 4 157402176 157405354 ECH