Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01230 ATGTCGTGGGAAGACGAGGTTGTGATTCGCGATGTCACCAATGCCGGTCTCGTTGTCAGTGATCGAATTGGCCGTGAAGTTTCGTCTCAGCTCGACCTAGAAGAAGCTCTGGAAGCTTCTAGATATGCTAGCCATCCGTATTCCACTCATCCCCGAGAGTGGCCTCCTTTAGTCGAGGTAGCAAATACATGGGAGTTGCCTCCCGTTCTTATTGAAAGGTACAGAGCAGCCGGCGGGGAAGGGACTGCTTTTTGTGGAATATTTCCAGAAATACGTAGGGCATGGGCTTCTGTGGACAACACCTTGTTTCTTTGGCGTTTTGATAAGTGGGATGGCCAGTGTCCTGAATATAGCAAGGAGGAACAAGCTATTTGTGCTGTCAGTCTTGCAAAATCAAAACCTGGTGTTTTCGTCGAAGCTATCCAATATCTTTTAATCTTAGCAACCCCAGTTGAGTTAATTTTAGTTGGAGTGTGCTGCTCTGGAGGAGCAGATGGCTCAGATCCATTTGCAGAAGTTTCGTTACAGCCACTGCCAGATTATACAGTATCATCTGACGGGGTTACGATGACATGTGTAGCATGTACTGACAAGGGCCGCATTTTCTTTGCTGGCCGTGATGGCCACATATACGAGCTTCTTTATTCAACTGGCTCAGGATGGCAGAAGCGCTGCAGAAAAGTATGTGTCACCGCTGGTCTAGGAAGTGTAATTTCAAGATGGGTCATACCAAATGTATTCAATTTTGGAGCTGTTGACCCTGTTGTTGAAATGGTTTTTGATAATGAGCGACAGATATTGTATGCTAGAACTGAAGAGATGAAAATTCAGGTTTATGTTCTTGGACCAATTGGTGATGGACCATTAAAAAAAGTGGCTGAAGAAAGGAATCTTGTCAATCAGAAAGATGCACATCATGGAAGCAGACAATCAAGTGGATCAAGAGCATCAAGTCGATCACCAAAGCCATCTATTGTTAGTATTTCACCCTTATCTACACTTGAATCCAAATGGCTACATCTTGTTGCTGTTTTATCAGATGGCAGAAGGATGTACCTATCCACCTCTCCAACTAGCGGAAGCCTGAACGGATTCAACACCAACCATCACAAACCTAGCTGTTTAAAGGTTGTAACAACAAGGCCTGCTCCTCCTTGGGGTGTTAGTGGCGGCCTCACATTTGGAACTATGGCTCTTGCTGGTAGACCACAAAATGAGGATCTCTCACTGAAAGTTGAGGCAGCCTATTATTCTGCGGGAACTCTTATTCTTTCTGATGCCTCACCTCCTACTATGCCTTCACTCCTTGTTTTAAACAAGGATTCGAGCACACAGTCATCACCATCGGGTAATCTAGGGACAGGTACGAGGAATTCCCGGGCACTACGGGAATCCGTATCTTCTTTACCAGTTGAAGGTCGAATGCTTTCTGTGGCCGATGTTTTACCTCTCCCAGATACTTTAGCTACTGTGCAGTCTCTATATTCAGAAATTGAGTTTGGTGTTTTTGAAAGCTCAATGGAATCGTGTGAAAGGGTGTCGGGCAAACTGTGGGCAAGGGGGGACCTCTCAACCCAACATATATTGCCAAGGAGGAGGATTGTCATCTTCAGCACCATGGGCATGATGGAAATTGTTTTTAACAGGCCACTAGACATTTTAAGGCGGCTATTAGAGTCCAACTTTCCGAGATCAGTTTTAGAAGATTTCTTCAATCGATTTAGTGCCGGGGAGGCAGCTGCAATGTGTCTAATGCTAGCTGCGAGGATAGTGCATTCTGAAAATTTTATCAGCAATGTTATTGCTGAGAAGGCAGCTGAAGCTTTTGAGGACCCAAGACTTGTTGGCATGCCACAACTTGAAGGCAGTAATGCATTATCAAACACAAGAACTGGTGGTGGTGGATTTAGCATGGGTCAGGTTGTTCAGGAGGCTGAGCCTGTTTTTTCAGGTGCACATGAAGGGCTCTGTTTGTGTTCATCTAGATTACTCTTTCCTCTATGGGAACTACCTGTAATGGTTATAAAAGGAAGTGCAGGTGCTTCAGGCACTTCATTTGAAAACGGGGTAGTTGTATGCAGACTATCTATTGGGGCTATGCAAGTCCTTGAACACAAACTTCGATCTTTAGAGAAATTCTTAAGATCTAGAAGGAACCAGAGGAGGGGACTTTATGGCTGTGTAGCAGGTTTAGGAGATGTTAGTGGTTCCATTCTGTATGGCAGTGGTTCTGCATTGGGTGCTGGTGACCGAAGTATGGTAAGAAACTTGTTTGGTGCATATTCCAGAAATATGGAATCCAATGGTGGTGGAGCCACAAATAAAAGGCAAAGGTTACCATATAGTCCTGCAGAATTAGCAGCCATGGAGGTGAGAGCAATGGAGTGCATTAGGCAGCTGCTCCTTAGGTCCGGTGAAGCTCTCTTTTTGCTTCAACTCCTCTCTCAGCATCATGTCACTCGCCTGGTTCAAGGATTTGATGCTAACCTTCAACAAGCCTTAGTTCAGTTAACATTTCATCAACTTGTTTGTTCCGAGGATGGCGACCGTCTTGCTACAAGGCTTATATCTGCTCTAATGGAGTATTACACTGGTACGGATGGCAGGGGAACTGTAGATGACATTAGTAAGAGATTAAGAGAGGGTTGTCCAAGCTACTACAAGGAGTCAGATTACAAATTCTTCTTAGCCGTGGAAGCCCTGGAGAGAGCTGCTGTGACTATAGATGATGAAGAAAAGGAGACCCTCGCTCGTGAGGCATTGAATTCCTTAAGCAAAGTTCCAGAGTCTGCGGACTTACGCACTGTTTGCAAACGTTTTGAGGATTTAAGGTTTTACGAAGCGGTTGTGTCCTTACCTCTTCAAAAGGCACAGGCTATCGACCCCGCAGGTGATGCTTATAATGATGAAATTGATGCAACAGTCAGAGAACAAGCACTTGCTCAGCGTGAGCAGTGTTATGAGATAATTATCAGCGCTTTGCGCTCACTTAAAGGTGACAGTGACACCTTGCGGAAGGAATTTAGCTCTCCGGTTAGATCTGCTTCACAATCTGCACTTGATCCAGCCTCTCGGAAAAAGTATATAAGCCAAATTGTTCAGCTGGGTGTCCAATCACCTGACAGAATTTTCCATGAGTATCTTTACCAGGCTATGATCGATTTAGGTCTTGAGAATGAACTGTTAGAGTATGGAGGCCCTGACCTGTTGTCATTTTTACAAAGTGCTGGTCGTAAACCCATACACGAGGTTCGTGCAGTGACTGCAACAACTTCTCCAATGGGCCAATCAGGAGCACCTATGTCCTCTAATCAAGTCAAGTACTATGAACTTTTGGCACGTTATTATGTCTTGAAGCGACAACATATGCTTGCTGCTCATGCATTGCTAAGACTAGCTGGAAGACCTTCAACCGACGGAGTTCCTGCTCTTGAACAAAGGTGTCAATACCTAAGCAATGCAGTTCTACAGGCAAAGAATGCAACTAATAGTGATATGTTGGTTAGTTCTACTCGAAGTTCCAGCGACACTGGATTACTAGATATGATAGAAGGGAAGCTTGCCGTTCTTCGGTTTCAGATAAAAATAAAAGACGAACTAGAGGCTATGGCTTCCAGTTCTGAGGTTTTACAGAGTACATCCAATTCTGTTGAAAATGGTATTGTCCCTGAGGCCAGTTCAACTCCTGATGCCAATGCAACACGGGAGAAAGCCAAGGAGTTATCATCAGATTTGAAGAGCATAACACAGTTATATAATGAATATGCCGTTCCGTTTAAGCTATGGGAGACATGCCTGGAGATGCTGTACTTTGCCAATTATTCGGGTGATAGTGACAGCAGCATCGTCAGAGAGACATGGGCTAGACTCATAGATCAAGCTATTTCAAGAGGCGGCATTGCTGAAGCTTGTTCAGTGCTTAAGAGAGTTGGACCCCGACTGTATCCCGGTGATGGAACTGTTTTACAGCTTGACATTATTTGTCTTCACCTGGAGAAGTCTGGACTGGAGAGATTAAATTCAGGGGTCGAATCCGTTGGAGATGAAGATGTTGCGAGAGCACTTGTTTCTGCTTGTAAGGGTGCAGCAGAACCTGTCTTGAACGCATATGATCAGTTGTTATCAAATGGGGCGATTTTGCCATCCCCAAATCTTAGATTACGGATGTTGAGATCAGTTCTAGTGGTACTTCGTGAGTGGGCTATGTCTATATATTCACACAGGATGGGTACAGGTGCCACTGGTTCTTCCATAATATTAGGTGGTGGATTCTCATTGGAACGTACAGTTGCTAGCCAAGGAATTCGGGACAAGATCACAAGTGTGGCAAACAGGTATATGACTGAAGTACGGAGGTTAGCCCTTCCACAGAGCCAAACAGAAGTGGTTTACCGCGGCTTCAAAGAACTCGAAGAGTCGCTCATAAGTCCTAATTCATATGGTCGATTTTGA 4452 0.447 MSWEDEVVIRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEVANTWELPPVLIERYRAAGGEGTAFCGIFPEIRRAWASVDNTLFLWRFDKWDGQCPEYSKEEQAICAVSLAKSKPGVFVEAIQYLLILATPVELILVGVCCSGGADGSDPFAEVSLQPLPDYTVSSDGVTMTCVACTDKGRIFFAGRDGHIYELLYSTGSGWQKRCRKVCVTAGLGSVISRWVIPNVFNFGAVDPVVEMVFDNERQILYARTEEMKIQVYVLGPIGDGPLKKVAEERNLVNQKDAHHGSRQSSGSRASSRSPKPSIVSISPLSTLESKWLHLVAVLSDGRRMYLSTSPTSGSLNGFNTNHHKPSCLKVVTTRPAPPWGVSGGLTFGTMALAGRPQNEDLSLKVEAAYYSAGTLILSDASPPTMPSLLVLNKDSSTQSSPSGNLGTGTRNSRALRESVSSLPVEGRMLSVADVLPLPDTLATVQSLYSEIEFGVFESSMESCERVSGKLWARGDLSTQHILPRRRIVIFSTMGMMEIVFNRPLDILRRLLESNFPRSVLEDFFNRFSAGEAAAMCLMLAARIVHSENFISNVIAEKAAEAFEDPRLVGMPQLEGSNALSNTRTGGGGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVIKGSAGASGTSFENGVVVCRLSIGAMQVLEHKLRSLEKFLRSRRNQRRGLYGCVAGLGDVSGSILYGSGSALGAGDRSMVRNLFGAYSRNMESNGGGATNKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLVQGFDANLQQALVQLTFHQLVCSEDGDRLATRLISALMEYYTGTDGRGTVDDISKRLREGCPSYYKESDYKFFLAVEALERAAVTIDDEEKETLAREALNSLSKVPESADLRTVCKRFEDLRFYEAVVSLPLQKAQAIDPAGDAYNDEIDATVREQALAQREQCYEIIISALRSLKGDSDTLRKEFSSPVRSASQSALDPASRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLSFLQSAGRKPIHEVRAVTATTSPMGQSGAPMSSNQVKYYELLARYYVLKRQHMLAAHALLRLAGRPSTDGVPALEQRCQYLSNAVLQAKNATNSDMLVSSTRSSSDTGLLDMIEGKLAVLRFQIKIKDELEAMASSSEVLQSTSNSVENGIVPEASSTPDANATREKAKELSSDLKSITQLYNEYAVPFKLWETCLEMLYFANYSGDSDSSIVRETWARLIDQAISRGGIAEACSVLKRVGPRLYPGDGTVLQLDIICLHLEKSGLERLNSGVESVGDEDVARALVSACKGAAEPVLNAYDQLLSNGAILPSPNLRLRMLRSVLVVLREWAMSIYSHRMGTGATGSSIILGGGFSLERTVASQGIRDKITSVANRYMTEVRRLALPQSQTEVVYRGFKELEESLISPNSYGRF 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01230 1483 FunFam Nuclear pore complex protein NUP155 894 1055 - -
Vivi2g01230 1483 Pfam Nup133 N terminal like 54 543 IPR014908 -
Vivi2g01230 1483 FunFam Nuclear pore complex protein NUP155 1181 1414 - -
Vivi2g01230 1483 MobiDBLite consensus disorder prediction 434 464 - -
Vivi2g01230 1483 MobiDBLite consensus disorder prediction 299 324 - -
Vivi2g01230 1483 FunFam Nuclear pore complex protein NUP155 1058 1155 - -
Vivi2g01230 1483 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 871 1290 IPR007187 -
Vivi2g01230 1483 Gene3D Nucleoporin, helical domain, central subdomain 1058 1155 IPR042537 -
Vivi2g01230 1483 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 12 1476 IPR004870 GO:0005643|GO:0006913|GO:0017056
Vivi2g01230 1483 MobiDBLite consensus disorder prediction 435 464 - -
Vivi2g01230 1483 Gene3D - 531 883 - -
Vivi2g01230 1483 MobiDBLite consensus disorder prediction 304 324 - -
Vivi2g01230 1483 Gene3D - 894 1055 IPR042533 -
Vivi2g01230 1483 Gene3D - 1181 1459 IPR042538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01230 Vivi-Chr2 50984873 50995088 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01230 2 50984873 50995088 Vivi2g01230 2 50984873 50995088 ECH