Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01229 ATGGCCGACGCTTTATCGGCTGTTCCGGCTGCCGTTCTTCGCAACCTTGCTGATAAGCTTTACGAAAAACGCAAAAATGCTGCTCTTGAGATTGAGAATATAGTGAAGCATTTAGCTAGTAATGGAGATCATGATAAAATTGTGGCTCTCATCAGTTTGTTGACTACAGAATTTACTTATTCACCGCAATCTAATCATCGAAAGGGAGGATTGATTGGATTGGCTGCTGCAACTGTTGGGTTGACTTCTGAAGCTGCTCAGCATCTTGAGCAAATTGTGCCTCCTGTGCTGAATTCTTTCTCTGACCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCACTATATAACATAGCTAAGGTTGTGAGAGGGGAATTTATTGTATTCTTCAACCAGATCTTTGATGCATTGTGCAAGCTTTCTGCAGACTCTGATGCAAATGTACAAAGTGCTGCTCACCTCTTAGATCGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCGCTGTTGAGGGAGCGCATGAATGTATTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTACTGGACAGTGTCCCAGATATTGATATGTTGGGTTTTCTTCCTGATTTTCTTGATGGATTGTTTAATATGTTAAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCTGCTCTTTCAGAGTTTCTTCAAGAAATTAAGAACTCACCATCTGTAGATTATGGTCGAATGGCTGAAATACTGGTAGAGAGGGCAAGTTCTCCAGATGAGTTTACGAGGCTAACAGCTCTCACATGGATAAATGAGTTTGTCAAACTTAGTGGAGATCAGCTTGTTCCGTATTATGCAGACATTCTTGGAGCCATTTTGCCTTGTATATCAGATAAAGAAGAGAAAATTAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACGTACCATGAAGGCTGATCCAGCTGAAGGATTTGATGTAGGAGAAATCCTCTCCATTGCCAGGAGGCAATTATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACCCTTTTAAATAACTACCGCCCTGAGGTTGTGCAATATTTGAATGACATATTTGACACCTTGCTCAAGGCACTTTCGGATCCATCTGATGAGGTTGTTCTTCTGGTTCTTGATGTTCATGCATGCATTGCGAAAGATCCTCAGCACTTTCGTCAGCTTGTTGTTTTTCTGATGCACAATTTCCGGATAGACAATTCACTTCTGGAGAAGCGTGGTGCTTTGATAATCCGTCGGCTTTGTGTGCTTTTGGATGCTGAGAGAGTCTACCGTGAACTTTCTACAATTCTAGAAGGAGAATCTGATTTGGATTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTGACATCATCAGAACTATCTGAGATTAGAGTTCTTTTGAAGCAAACACTGGTGAATCCTGCTGGGAGGGATTTATATGTTTCTTTGTATGCCTCATGGTGTCATTCTCCAACGGCGATTATAAGTCTTTGCTTCTTAGCTCAGACTTACCAACATGCGAGTACTGTGATTCAATCTCTGTCAGAGGAGGATATTAATGTCAAATTCTTAGTACAGCTGGATAAATTGATTCGTTTGCTGGAAACTCCGGTCTTTGCTTATCTTCGACTGCAGCTTCTGGAACCTGGAAGATATACATGGTTATTCAAAGCACTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGCGCTGCTTTCAAGATACTGAAAACTCGCTTGAAAGCTGTGCCAGCGTATTCTTTCAATGGTGACCAATTGAAGAAAACATCCTCTGGGGCCCCCTATCAATTCCTCCATCACATGTCTGGTGGATCTCACATCACTGAGGATGGTGACGTAGCCGTGGACAATGGGAACTCGCACAATGGAATCAATTTTGCTACAAGGATAAAACAGTTTCAGGAAATGCAGCAACAGCATCGCGAGCATTTTAAAACACAAGCACAGATACGCAGAAAGGTCACACCTGTACCAAAGGAGGAGGAGGTACCGAAACAACAAGAAGAAACAAAGAGACCACCTCATTTGAGTGAGCTTAATGTTGTACCAAGATCATCCAGGAGATCTAGCGAGCTAGCTAGATAA 2181 0.4168 MADALSAVPAAVLRNLADKLYEKRKNAALEIENIVKHLASNGDHDKIVALISLLTTEFTYSPQSNHRKGGLIGLAAATVGLTSEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGEFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVERASSPDEFTRLTALTWINEFVKLSGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRTMKADPAEGFDVGEILSIARRQLSSEWEATRIEALHWISTLLNNYRPEVVQYLNDIFDTLLKALSDPSDEVVLLVLDVHACIAKDPQHFRQLVVFLMHNFRIDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRVLLKQTLVNPAGRDLYVSLYASWCHSPTAIISLCFLAQTYQHASTVIQSLSEEDINVKFLVQLDKLIRLLETPVFAYLRLQLLEPGRYTWLFKALYGLLMLLPQQSAAFKILKTRLKAVPAYSFNGDQLKKTSSGAPYQFLHHMSGGSHITEDGDVAVDNGNSHNGINFATRIKQFQEMQQQHREHFKTQAQIRRKVTPVPKEEEVPKQQEETKRPPHLSELNVVPRSSRRSSELAR 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01229 726 FunFam ARM repeat superfamily protein 5 125 - -
Vivi2g01229 726 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Vivi2g01229 726 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Vivi2g01229 726 PANTHER TAX1 BINDING PROTEIN-RELATED 8 683 IPR026825 GO:0006661|GO:0070772
Vivi2g01229 726 MobiDBLite consensus disorder prediction 673 726 - -
Vivi2g01229 726 SUPERFAMILY ARM repeat 4 545 IPR016024 -
Vivi2g01229 726 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Vivi2g01229 726 Gene3D - 247 411 IPR011989 -
Vivi2g01229 726 Gene3D - 1 246 IPR011989 -
Vivi2g01229 726 FunFam protein VAC14 homolog 126 248 - -
Vivi2g01229 726 MobiDBLite consensus disorder prediction 673 707 - -
Vivi2g01229 726 FunFam protein VAC14 homolog isoform X1 249 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01229 Vivi-Chr2 50957939 50964991 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01229 2 50957939 50964991 Vivi2g01229 2 50957939 50964991 ECH