Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01227 ATGGAGTCGAAGGGTCTGCGATTCATGACCCATCAATCAATTTTCACCATGGTTGGATCTGCTGACCTTGATGGGTTGAAGAAGCTCTTAGAGCAACTCAGAAAGGAAGAAGATGATAATAGTAATAATGGGTCGTCATCATCATCTTCACCTGTGTCGGTTTATGATGTTATGGCTCTTCAAAATGATCATGGTGAAACTCCTCTTTACATCGCTGCTGAACGTAATTTGAAGCAAGTTTTCAGCTTTTTGCTGAATTTGTGTGATTTTGAGATTCTCAAGATTCGTTCCAAGTCTGATATGAATGCTTTTCATGTTGCTGCTAAGCGTGGCCATTTGGATATTGTGAAGGAGATTTTGAGTTCTTGGCCTGAGGTTTGTAAATTGTGCGACTCGTCGAACACCAGCCCTTTATATTCTGCTGCAGTTCAAGACCACTTGGATGTGGTGAATTCTATTTTGGATGTTGATGTCGGCTCCATGTTTATAGTTAGAAAAAATGGGAAAACTGCGCTACACAATGCTGTTAGGTACGGCGTCGATCGTATCGTGAAAGCACTTATTGCCCGCGATACAGGAATTGTTTGCATTAAAGATAAAAAAGGTCAAACTGCACTGCATATGGCTGTCAAAGGACAGAGTACATCGGTGGTGGAAGAGATATTACAAGCTGATCCGACTATATTGAATGAGCGCGATAAGAAGGGTAATACAGCTCTTCACATGGCTACGAGGAAAGGCCGGTCACAGATAGTGAGCCTTTTGTTAAGCTATTCAGCTGTGGATGTTAATGCCATCAATAAGCAACAAGAAACAGCTTTGGATTTGGCAGATAAACTTCCATATGGATCTTCAGCTTTAGAAATCCAAGAAGCACTTTCAGAATATGGTGCTAAATATGCAAGACATGTTGGTAAATTAGATGAAGCAATGGAACTTAAAAGAACTGTAAGTGATATAAAGCATGAGGTGCAATCACAGCTTATTCAGAACGAAAAAACTCGGCGACGAGTTTCTGGTATAGCTAAGGAATTGAAGAAACTTCATAGAGAAGCAGTTCAAAACACCATTAACTCTGTCACAGTGGTTGCTGTCCTTTTCGCCTCGATAGCGTTCTTGGCTATATTCAATTTGCCAGGTCAATATATCATGAAAGGACCACAGACAGGAAAATCTAACATAGCCGATCATGTTGGATTCCAAGTTTTCTGTCTCTTGAATTCGACGTCTCTTTTCATTTCTCTTGCTGTTGTCGTTGTTCAAATCACTTTGGTAGCTTGGGATACTAGGGCTCAGAGACAAATCGTGTCGGTCGTTAACAAGTTAATGTGGGCTGCATGTGCTTGCACATGTGGCGCGTTTTTGGCTATAGCTTTCGAGGTTGTTGGAAAGAAAAAATGGATGGCCATTACCATAACAGCTGTAGGGACACCAATTCTAGTTGGGACTCTAGCAAGCATGTGCTACTTTGTTTTCCGGCAACATTTTGGTATTTTTCAAAGCGATTCCCAAAGACGCATCAAGCGAGCAAGTGGAAGCAAATCTTTCTCGTGGTCTTACTCTGCAAATATTTCAGATTTGGACGAATACAATTCAGACATTGAGAAGATCTATGCTCTGTAA 1623 0.4104 MESKGLRFMTHQSIFTMVGSADLDGLKKLLEQLRKEEDDNSNNGSSSSSSPVSVYDVMALQNDHGETPLYIAAERNLKQVFSFLLNLCDFEILKIRSKSDMNAFHVAAKRGHLDIVKEILSSWPEVCKLCDSSNTSPLYSAAVQDHLDVVNSILDVDVGSMFIVRKNGKTALHNAVRYGVDRIVKALIARDTGIVCIKDKKGQTALHMAVKGQSTSVVEEILQADPTILNERDKKGNTALHMATRKGRSQIVSLLLSYSAVDVNAINKQQETALDLADKLPYGSSALEIQEALSEYGAKYARHVGKLDEAMELKRTVSDIKHEVQSQLIQNEKTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYIMKGPQTGKSNIADHVGFQVFCLLNSTSLFISLAVVVVQITLVAWDTRAQRQIVSVVNKLMWAACACTCGAFLAIAFEVVGKKKWMAITITAVGTPILVGTLASMCYFVFRQHFGIFQSDSQRRIKRASGSKSFSWSYSANISDLDEYNSDIEKIYAL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01227 540 ProSiteProfiles Ankyrin repeat profile. 235 260 IPR002110 GO:0005515
Vivi2g01227 540 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 28 519 - -
Vivi2g01227 540 Pfam Ankyrin repeats (3 copies) 81 155 IPR002110 GO:0005515
Vivi2g01227 540 Pfam Ankyrin repeats (3 copies) 162 228 IPR002110 GO:0005515
Vivi2g01227 540 Coils Coil 331 351 - -
Vivi2g01227 540 Gene3D - 159 314 IPR036770 -
Vivi2g01227 540 SUPERFAMILY Ankyrin repeat 18 298 IPR036770 -
Vivi2g01227 540 ProSiteProfiles Ankyrin repeat profile. 167 194 IPR002110 GO:0005515
Vivi2g01227 540 Pfam Ankyrin repeat 236 267 IPR002110 GO:0005515
Vivi2g01227 540 Pfam Domain of unknown function 351 458 IPR026961 -
Vivi2g01227 540 Coils Coil 23 43 - -
Vivi2g01227 540 ProSiteProfiles Ankyrin repeat region circular profile. 235 260 - -
Vivi2g01227 540 Gene3D - 8 158 IPR036770 -
Vivi2g01227 540 ProSiteProfiles Ankyrin repeat region circular profile. 167 194 - -
Vivi2g01227 540 SMART ANK_2a 235 265 IPR002110 GO:0005515
Vivi2g01227 540 SMART ANK_2a 201 230 IPR002110 GO:0005515
Vivi2g01227 540 SMART ANK_2a 99 128 IPR002110 GO:0005515
Vivi2g01227 540 SMART ANK_2a 64 94 IPR002110 GO:0005515
Vivi2g01227 540 SMART ANK_2a 133 163 IPR002110 GO:0005515
Vivi2g01227 540 SMART ANK_2a 167 196 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01227 Vivi-Chr2 50955450 50957864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01227 1 540 Miscellaneous Gene Families AT2G01680 68.081 0.0 728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01227 2 50955450 50957864 Vivi2g01227 2 50955450 50957864 ECH