Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01221 ATGATTTGTATGGTATCTCGATCTGGAAGGGAGTTGCAGAGATACAACACCATGGGTGGCAGACAAGTTGTAGGATGCATACCTTATAGATATAAACAAGACATAAATGGTAATAGAAGCAACGAGTTGGAAGTACTAATGGTGAGTTCACAGAAAACACAAAGATTAATGTTTCCAAAGGGAGGATGGGAACTTGATGAATCTCTACAAGAAGCTGCTTCTAGGGAGTCTCTTGAAGAAGCAGGAGTCATAGGATTAGTTGAGTGTGAATTGGGACAGTGGAATTTCATTAGCAAAAGATATGGAATATACTATGAAGGGTACATGTTCCCTTTGTTTGTGAAAGAGCAACTTGATTATTGGCCTGAGAAAAATCTTAGGACAAGAGTTTGGATGACTGTTGGTGAAGCTCGGGAAGCTTGTCAACATTGGTGGATGAAAGAAGCATTAGATATATTGCTTCAAAGACTCATTTCTTCACAGAAACAATAA 492 0.3862 MICMVSRSGRELQRYNTMGGRQVVGCIPYRYKQDINGNRSNELEVLMVSSQKTQRLMFPKGGWELDESLQEAASRESLEEAGVIGLVECELGQWNFISKRYGIYYEGYMFPLFVKEQLDYWPEKNLRTRVWMTVGEAREACQHWWMKEALDILLQRLISSQKQ 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01221 163 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 4 156 - -
Vivi2g01221 163 CDD Nudix_Hydrolase_9 22 147 IPR047198 GO:0016462
Vivi2g01221 163 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Vivi2g01221 163 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
Vivi2g01221 163 SUPERFAMILY Nudix 19 158 IPR015797 -
Vivi2g01221 163 Pfam NUDIX domain 42 148 IPR000086 -
Vivi2g01221 163 FunFam Nudix hydrolase 17, mitochondrial 5 156 - -
Vivi2g01221 163 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01221 Vivi-Chr2 50902105 50903581 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01221 2 50902105 50903581 Vivi2g01221 2 50902105 50903581 ECH