Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02100 ATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAACCCTTCAGAGGGGGACATCTTGGTCTGCAGCTCATGCCTGGTATGACTGATCGAGACACAAAGCCATATCTGCCTGCTCGTGATCCAGCTGTGTTAATGGGTGCTAATGGAACTTTTCACCCTAGAGACTGCGTTGTTTCCGAAGCACCAATGCAGTTGAACTATGTTAGAGATAATTGGACAAGCCAAAGGGATAGGTATTTCAGTATGCAGCAGCCCACAAATCCTAATTATGCTGTTCTTCCTGAAACATCAGTAGCTCCGAACTTGCAAATTATACAACCACCTGATACATCGAGAGATGAGAAAGTGGATAGAATTGAAGAGTTAGTTGTCAAAAAGGAAGGTGGCCAGTCGAAGAAAAGGCAGACTAAGGGTGCTCTGACGACCCCAAAAGCTAAGAAACCTAGGAAGCCGAAGGATAATGGCAATGTTCCAGTTCAACGTGTGAAGCCCCCGAAGAAGACTATGGAGCTTGTAATTAATGGAATTGATATGGACATTTCTGGTCTTCCCATTCCAGTTTGTTCGTGTACCGGGAGTCCTCAGCAGTGCTATCGTTGGGGTTGTGGAGGTTGGCAATCGGCCTGTTGCACCACAAATGTGTCGATATATCCTTTACCAATGAGCATGAAAAGGCGTGGTGCTAGGATAGCTGGGAGGAAAATGAGCCAAGGTGCGTTTAAAAAGGTTTTAGAGAAACTTGCGGCTGAAGGTTATAATTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCTAGACATGGCACCAACAAGTTTGTTACCATCAGGTAG 840 0.45 MDDDVLNMPNWGYYEPFRGGHLGLQLMPGMTDRDTKPYLPARDPAVLMGANGTFHPRDCVVSEAPMQLNYVRDNWTSQRDRYFSMQQPTNPNYAVLPETSVAPNLQIIQPPDTSRDEKVDRIEELVVKKEGGQSKKRQTKGALTTPKAKKPRKPKDNGNVPVQRVKPPKKTMELVINGIDMDISGLPIPVCSCTGSPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02100 279 MobiDBLite consensus disorder prediction 128 166 - -
Viun3g02100 279 Pfam GAGA binding protein-like family 1 279 IPR010409 -
Viun3g02100 279 PANTHER - 1 279 IPR010409 -
Viun3g02100 279 SMART GAGA_bind_2 1 279 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02100 Viun-Chr3 17308369 17310310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02100 1 279 BBR or BPC Transcription factor family AT2G01930 55.705 2.18e-104 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Viun3g02100 GAGA_bind 2.4e-103 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02100 3 17308369 17310310 Viun3g02100 3 17308369 17310310 ECH